Evidence map›Paper›PMID 22395468›Full record

ArticleEpigenetics2012

Histone deacetylase 3 (HDAC3) participates in the transcriptional repression of the p16 (INK4a) gene in mammary gland of the female rat offspring exposed to an early-life high-fat diet.

Shasha Zheng, Qian Li, Yukun Zhang, Zachary Balluff, Yuan-Xiang Pan

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Epigenetics of Aging and Aging-Associated Diseases.International journal of molecular sciences · 2021
    Review
  5. Article
  6. Review
  7. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Shasha ZhengDepartment of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, IL, USA.
Qian Li
Yukun Zhang
Zachary Balluff
Yuan-Xiang Pan
Urbana University · USUniversity of Illinois Urbana-Champaign · US

Funding

Maternal-Fetal Nutrition Controls Expression of Cell Cycle Genes in OffspringR03CA139557 · NCI · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI PAN, YUAN-XIANG · 2009 to 2010
$147k
NCI NIH HHS CA-139557
6 · The paper itself

Abstract

Maternal exposure to environmental agents throughout pregnancy and lactation may affect offspring's mammary gland growth and alter the epigenome. This may predispose the offspring's mammary glands to be more susceptible to carcinogenesis. The purpose of this study was to examine the effect of a maternal high-fat diet on the regulation of p16 (INK4a) gene expression in the mammary gland of rat offspring. Timed-pregnant Sprague-Dawley rats were fed one of the two diets, a control (C, 16% of fat) or a high fat (HF, 45% of fat) diet, throughout gestation and lactation and sacrificed at 12 weeks of age. Compared with C, HF offspring showed a decrease of p16 (INK4a) gene expression in the mammary gland at both mRNA and protein levels. Chromatin immunoprecipitation (ChIP) assay demonstrated that the downregulation of p16 (INK4a) transcription in HF offspring was associated with reduced acetylation of histone H4 and increased recruitment of histone deacetylase 3 (HDAC3) within the p16 (INK4a) promoter region, but was not associated with acetylation of histone H3 or HDAC1. Methylated DNA immunoprecipitation (MeDIP) did not detect differences in methylation at different regions of the p16 (INK4a) gene between C and HF offspring. We conclude that maternal high fat exposure represses p16 (INK4a) gene expression in the mammary gland of offspring through changes of histone modifications and HDAC3 binding activity within the regulatory regions of the p16 (INK4a) gene.

Indexed as

Diet, High-FatTranscription, GeneticAcetylationAnimalsAnimals, NewbornBody WeightCyclin-Dependent Kinase Inhibitor p16DNA MethylationFeeding BehaviorFemaleGene Expression Regulation, DevelopmentalHistone Deacetylase 3Histone DeacetylasesHistonesHumansMammary Glands, AnimalCyclin-Dependent Kinase Inhibitor p16Histone Deacetylase 3Histone DeacetylasesHistonesRepressor ProteinsRNA, Messenger

Identifiers

PMID22395468
PMCPMC3335911
OpenAlexW2031929350

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.