Evidence map›Paper›PMID 22391458›Full record

ArticleMathematical biosciences2012

Instabilities of the resting state in a mathematical model of calcium handling in cardiac myocytes.

Aslak Tveito, Glenn Terje Lines, Johan Hake, Andrew G Edwards

Open access · hybridAbstract read
In one paragraph

Article in Mathematical biosciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 93% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Aslak TveitoCenter for Biomedical Computing, Simula Research Laboratory, and Center for Cardiological Innovation, Oslo University Hospital, Norway.
Glenn Terje Lines
Johan Hake
Andrew G Edwards
Oslo University Hospital · NOSimula Research Laboratory · NOUniversity of California, San Diego · US

Funding

VISUALIZATION TOOLS FOR AUTOMATED MOLECULAR MICROSCOPYP41RR008605 · NCRR · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI PAPADOPOULOS, PHILIP · 1994 to 2011
$28.1M
National Biomedical Computation Resource - Competitive Revision SupplementP41GM103426 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AMARO, ROMMIE E · 2012 to 2019
$14.0M
NCRR NIH HHS 5P41RR008605-19NCRR NIH HHS P41 RR008605NIGMS NIH HHS 8 P41 GM103426-19NIGMS NIH HHS P41 GM103426
6 · The paper itself

Abstract

We analyze a recently published model of calcium handling in cardiac myocytes in order to find conditions for the presence of instabilities in the resting state of the model. Such instabilities can create calcium waves which in turn may be able to initiate cardiac arrhythmias. The model was developed by Swietach, Spitzer and Vaughan-Jones in order to study the effect, on calcium waves, of varying ryanodine receptor (RyR)-permeability, sarco/endoplasmic reticulum calcium ATPase (SERCA) and calcium diffusion. We study the model using the extracellular calcium concentration c(e) and the maximal velocity of the SERCA-pump v(SERCA) as control parameters. In the (c(e),v(SERCA))-domain we derive an explicit function v∗=v∗(c(e)), and we claim that any resting state based on parameters that lie above the curve (i.e. any pair (c(e),v(SERCA)) such that with v(SERCA) > v∗(c(e))) is unstable in the sense that small perturbations will grow and can eventually turn into a calcium wave. And conversely; any pair (c(e),v(SERCA)) below the curve is stable in the sense that small perturbations to the resting state will decay to rest. This claim is supported by analyzing the stability of the system in terms of computing the eigenmodes of the linearized model. Furthermore, the claim is supported by direct simulations based on the non-linear model. Since the curve separating stable from unstable states is given as an explicit function, we can show how stability depends on other parameters of the model.

Indexed as

Models, CardiovascularCalcium SignalingComputer SimulationHumansMyocytes, CardiacSarcoplasmic ReticulumSarcoplasmic Reticulum Calcium-Transporting ATPasesStochastic ProcessesSarcoplasmic Reticulum Calcium-Transporting ATPases

Identifiers

PMID22391458
PMCPMC3320113
OpenAlexW1976693831

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.