Evidence map›Paper›PMID 22388746›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Structure of a type III secretion needle at 7-Å resolution provides insights into its assembly and signaling mechanisms.

Takashi Fujii, Martin Cheung, Amandine Blanco, Takayuki Kato, Ariel J Blocker, Keiichi Namba

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 76 citations in OpenAlex.

  1. Targeting Type III Secretion System usingIndian journal of microbiology · 2025
    Review
  2. Solid-State NMR Structure of Amyloid-β Fibrils.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  3. Review
  4. Helical reconstruction ofBiochemistry and biophysics reports · 2021
    Article
  5. TheMicroorganisms · 2021
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. The type III secretion system needle, tip, and translocon.Protein science : a publication of the Protein Society · 2019
    Review
  11. International journal of molecular sciences · 2019
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Review
  19. Type Three Secretion System in Attaching and Effacing Pathogens.Frontiers in cellular and infection microbiology · 2016
    Review
  20. The Many Faces of IpaB.Frontiers in cellular and infection microbiology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Takashi FujiiGraduate School of Frontier Biosciences, Osaka University, 1-3 Yamadaoka, Suita, Osaka 565-0871, Japan.
Martin Cheung
Amandine Blanco
Takayuki Kato
Ariel J Blocker
Keiichi Namba
University of Bristol · GBOsaka University · JPRIKEN BioResource Research Center · JP

Funding

Medical Research Council G0401595Medical Research Council MR/J002097/1Wellcome Trust 088231
6 · The paper itself

Abstract

Type III secretion systems of Gram-negative bacteria form injection devices that deliver effector proteins into eukaryotic cells during infection. They span both bacterial membranes and the extracellular space to connect with the host cell plasma membrane. Their extracellular portion is a needle-like, hollow tube that serves as a secretion conduit for effector proteins. The needle of Shigella flexneri is approximately 50-nm long and 7-nm thick and is made by the helical assembly of one protein, MxiH. We provide a 7-Å resolution 3D image reconstruction of the Shigella needle by electron cryomicroscopy, which resolves α-helices and a β-hairpin that has never been observed in the crystal and solution structures of needle proteins, including MxiH. An atomic model of the needle based on the 3D-density map, in comparison with that of the bacterial-flagellar filament, provides insights into how such a thin tubular structure is stably assembled by intricate intermolecular interactions. The map also illuminates how the needle-length control protein functions as a ruler within the central channel during export of MxiH for assembly at the distal end of the needle, and how the secretion-activation signal may be transduced through a conformational change of the needle upon host-cell contact.

Indexed as

Bacterial ProteinsCalibrationCell MembraneCryoelectron MicroscopyImage Processing, Computer-AssistedModels, MolecularMolecular ConformationPolymersProtein ConformationProtein Structure, SecondaryProtein Structure, TertiaryShigella flexneriSignal TransductionTemperatureBacterial ProteinsMxiH protein, ShigellaPolymers

Identifiers

PMID22388746
PMCPMC3311390
OpenAlexW2027352542

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.