Evidence map›Paper›PMID 22388489›Full record

ArticlePlant physiology2012

Loss of Cellulose synthase-like F6 function affects mixed-linkage glucan deposition, cell wall mechanical properties, and defense responses in vegetative tissues of rice.

Miguel E Vega-Sánchez, Yves Verhertbruggen, Ulla Christensen, Xuewei Chen, Vaishali Sharma, Patanjali Varanasi, Stephen A Jobling, Mark Talbot, Rosemary G White, Michael Joo and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 93 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed, 1 pooled it
16.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 1 synthesis or guideline pooled it, 183 citations in OpenAlex.

  1. Pooled it
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  3. Review
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  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. The Overexpression ofPlants (Basel, Switzerland) · 2025
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  12. Review
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  14. Article
  15. Is theFood chemistry. Molecular sciences · 2024
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  16. Genome-Wide Analysis ofInternational journal of molecular sciences · 2024
    Article
  17. Article
  18. Review
  19. Transcriptomic analysis of the response ofFrontiers in microbiology · 2024
    Article
  20. Article

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Miguel E Vega-SánchezJoint BioEnergy Institute, Emeryville, California 94608, USA.
Yves Verhertbruggen
Ulla Christensen
Xuewei Chen
Vaishali Sharma
Patanjali Varanasi
Stephen A Jobling
Mark Talbot
Rosemary G White
Michael Joo
Seema Singh
Manfred Auer
Henrik V Scheller
Pamela C Ronald
Health Sciences and Nutrition · AUUniversity of California, Davis · USACT GovernmentJoint BioEnergy Institute · USLawrence Berkeley National Laboratory · USPlant Industry · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mixed-linkage glucan (MLG) is a cell wall polysaccharide containing a backbone of unbranched (1,3)- and (1,4)-linked β-glucosyl residues. Based on its occurrence in plants and chemical characteristics, MLG has primarily been associated with the regulation of cell wall expansion due to its high and transient accumulation in young, expanding tissues. The Cellulose synthase-like F (CslF) subfamily of glycosyltransferases has previously been implicated in mediating the biosynthesis of this polymer. We confirmed that the rice (Oryza sativa) CslF6 gene mediates the biosynthesis of MLG by overexpressing it in Nicotiana benthamiana. Rice cslf6 knockout mutants show a slight decrease in height and stem diameter but otherwise grew normally during vegetative development. However, cslf6 mutants display a drastic decrease in MLG content (97% reduction in coleoptiles and virtually undetectable in other tissues). Immunodetection with an anti-MLG monoclonal antibody revealed that the coleoptiles and leaves retain trace amounts of MLG only in specific cell types such as sclerenchyma fibers. These results correlate with the absence of endogenous MLG synthase activity in mutant seedlings and 4-week-old sheaths. Mutant cell walls are weaker in mature stems but not seedlings, and more brittle in both stems and seedlings, compared to wild type. Mutants also display lesion mimic phenotypes in leaves, which correlates with enhanced defense-related gene expression and enhanced disease resistance. Taken together, our results underline a weaker role of MLG in cell expansion than previously thought, and highlight a structural role for MLG in nonexpanding, mature stem tissues in rice.

Indexed as

Antibodies, MonoclonalCell WallEnzyme ActivationGene Expression Regulation, PlantGene Knockout TechniquesGenes, PlantGlucansGlucosyltransferasesMutationNicotianaOryzaPlant DiseasesPlant ImmunityPlant LeavesPlant ProteinsPlants, Genetically ModifiedAntibodies, Monoclonalcellulose synthaseGlucansGlucosyltransferasesPlant Proteins

Identifiers

PMID22388489
PMCPMC3375985
OpenAlexW1994470475

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.