Evidence map›Paper›PMID 22388287›Full record

ArticleNature methods2012

TULIPs: tunable, light-controlled interacting protein tags for cell biology.

Devin Strickland, Yuan Lin, Elizabeth Wagner, C Matthew Hope, Josiah Zayner, Chloe Antoniou, Tobin R Sosnick, Eric L Weiss, Michael Glotzer

Abstract read
In one paragraph

Article in Nature methods, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 270 papers.

0numbers the graph read from it
0cells of the map it votes in
270citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

270 citing papers in PubMed.

  1. Article
  2. Review
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  4. Conditionally Activatable Antibody Platforms: Mechanisms, Modalities, and Clinical Translation Potential.BioDrugs : clinical immunotherapeutics, biopharmaceuticals and gene therapy · 2026
    Review
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  8. Hydraulic Activation of the AsLOV2 Photoreceptor.bioRxiv : the preprint server for biology · 2025
    Article
  9. Switchbody, an Antigen-Responsive Enzyme Switch Based on Antibody and Its Working Principle.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Article
  15. Review
  16. Article
  17. Article
  18. Effects of binding partners on thermal reversion rates of photoswitchable molecules.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  19. Article
  20. Design of a light and CaProceedings of the National Academy of Sciences of the United States of America · 2025
    Article

210 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Devin StricklandDepartment of Molecular Genetics and Cell Biology, The University of Chicago, Chicago, Illinois, USA.
Yuan Lin
Elizabeth Wagner
C Matthew Hope
Josiah Zayner
Chloe Antoniou
Tobin R Sosnick
Eric L Weiss
Michael Glotzer

Funding

Spatial and temporal control of cell behavior with a genetically-encoded photoswiR01GM088668 · NIGMS · UNIVERSITY OF CHICAGO · PI GLOTZER, MICHAEL A., SOSNICK, TOBIN R · 2009 to 2012
$1.4M
NIGMS NIH HHS GM088668NIGMS NIH HHS R01 GM088668
6 · The paper itself

Abstract

Naturally photoswitchable proteins offer a means of directly manipulating the formation of protein complexes that drive a diversity of cellular processes. We developed tunable light-inducible dimerization tags (TULIPs) based on a synthetic interaction between the LOV2 domain of Avena sativa phototropin 1 (AsLOV2) and an engineered PDZ domain (ePDZ). TULIPs can recruit proteins to diverse structures in living yeast and mammalian cells, either globally or with precise spatial control using a steerable laser. The equilibrium binding and kinetic parameters of the interaction are tunable by mutation, making TULIPs readily adaptable to signaling pathways with varying sensitivities and response times. We demonstrate the utility of TULIPs by conferring light sensitivity to functionally distinct components of the yeast mating pathway and by directing the site of cell polarization.

Indexed as

Cell BiologyLightProtein EngineeringAnimalsAvenaCell PolarityEnzyme ActivationKineticsLasersMitogen-Activated Protein KinasesModels, MolecularMutationPDZ DomainsPhototropinsProtein BindingProteinsMitogen-Activated Protein KinasesPhototropinsProteins

Identifiers

PMID22388287
PMCPMC3444151

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.