Evidence map›Paper›PMID 22387982›Full record

ArticleToxicology2012

High-performance metabolic profiling of plasma from seven mammalian species for simultaneous environmental chemical surveillance and bioeffect monitoring.

Youngja H Park, Kichun Lee, Quinlyn A Soltow, Frederick H Strobel, Kenneth L Brigham, Richard E Parker, Mark E Wilson, Roy L Sutliff, Keith G Mansfield, Lynn M Wachtman and 2 more

Abstract read
In one paragraph

Article in Toxicology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed.

  1. Trial
  2. Trial
  3. Metabolomics of Aerobic Exercise in Chronic Stroke Survivors: A Pilot Study.Journal of stroke and cerebrovascular diseases : the official journal of National Stroke Association · 2019
    Trial
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Advancing Exposomic Research in Prenatal Respiratory Disease Programming.Immunology and allergy clinics of North America · 2023
    Review
  13. Exposure forecasting - ExpoCast - for data-poor chemicals in commerce and the environment.Journal of exposure science & environmental epidemiology · 2022
    Review
  14. Article
  15. Modular Evolution of the Drosophila Metabolome.Molecular biology and evolution · 2022
    Article
  16. Review
  17. Article
  18. High-throughput PBTK models forExpert opinion on drug metabolism & toxicology · 2021
    Review
  19. Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Youngja H ParkClinical Biomarkers Laboratory, Department of Medicine, Emory University, Atlanta, GA 30322, USA.
Kichun Lee
Quinlyn A Soltow
Frederick H Strobel
Kenneth L Brigham
Richard E Parker
Mark E Wilson
Roy L Sutliff
Keith G Mansfield
Lynn M Wachtman
Thomas R Ziegler
Dean P Jones

Funding

YNPRC NHP CLINICAL MEDICINE RESIDENCY PROGRAM - SUPPLEMENTP51RR000165 · NCRR · EMORY UNIVERSITY · PI ALTMAN, JOHN DAVID · 1985 to 2011
$114.0M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025008 · NCRR · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2007 to 2011
$29.0M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
Graduate and Postdoctoral Training in ToxicologyT32ES012870 · NIEHS · EMORY UNIVERSITY · PI Carmen Joseph Marsit · 2004 to 2026
$9.1M
PROJECT 3: METABOLOMIC BIOMARKERS OF PARKINSON'S DISEASEP01ES016731 · NIEHS · EMORY UNIVERSITY · PI MILLER, GARY W · 2008 to 2012
$6.7M
Thioredoxin-2 protection against mitochondrial oxidative toxicityR01ES009047 · NIEHS · EMORY UNIVERSITY · PI JONES, DEAN PAUL · 1998 to 2013
$3.9M
Nuclear and Cytoplasmic Redox in Oxidative StressR01ES011195 · NIEHS · EMORY UNIVERSITY · PI JONES, DEAN PAUL · 2001 to 2011
$3.3M
A metabolomic model of aging in the common marmosetR01AG038746 · NIA · EMORY UNIVERSITY · PI JONES, DEAN PAUL, PROMISLOW, DANIEL EDWARD · 2010 to 2014
$2.5M
Neuroendocrine mediation of socially induced anovulationR01HD046501 · NICHD · EMORY UNIVERSITY · PI WILSON, MARK E · 2005 to 2009
$1.9M
Pathogenesis of Liver-Dependent Acute Lung InjuryR01HL083019 · NHLBI · EMORY UNIVERSITY · PI BRIGHAM, KENNETH L · 2007 to 2011
$1.9M
AIDS, Endothelial Oxidative Stress and AtherosclerosisR01HL070892 · NHLBI · EMORY UNIVERSITY · PI SUTLIFF, ROY L · 2003 to 2007
$1.7M
Patient Oriented Research In Clinical NutritionK24DK096574 · NIDDK · EMORY UNIVERSITY · PI ZIEGLER, THOMAS R · 2012 to 2016
$888k
NCATS NIH HHS UL1 TR000454NCRR NIH HHS K24 RR023356NCRR NIH HHS P51 RR000165NCRR NIH HHS RR00165NCRR NIH HHS RR023356NCRR NIH HHS RR025008NCRR NIH HHS UL1 RR025008NHLBI NIH HHS HL070892NHLBI NIH HHS HL083019NHLBI NIH HHS R01 HL070892NHLBI NIH HHS R01 HL083019NIA NIH HHS AG038746NIA NIH HHS R01 AG038746NICHD NIH HHS HD46501NICHD NIH HHS R01 HD046501NIDDK NIH HHS K24 DK096574NIEHS NIH HHS ES011195NIEHS NIH HHS ES016731NIEHS NIH HHS P01 ES016731NIEHS NIH HHS R01 ES009047NIEHS NIH HHS R01 ES011195NIEHS NIH HHS T32 ES012870
6 · The paper itself

Abstract

High-performance metabolic profiling (HPMP) by Fourier-transform mass spectrometry coupled to liquid chromatography gives relative quantification of thousands of chemicals in biologic samples but has had little development for use in toxicology research. In principle, the approach could be useful to detect complex metabolic response patterns to toxicologic exposures and to detect unusual abundances or patterns of potentially toxic chemicals. As an initial study to develop these possible uses, we applied HPMP and bioinformatics analysis to plasma of humans, rhesus macaques, marmosets, pigs, sheep, rats and mice to determine: (1) whether more chemicals are detected in humans living in a less controlled environment than captive species and (2) whether a subset of plasma chemicals with similar inter-species and intra-species variation could be identified for use in comparative toxicology. Results show that the number of chemicals detected was similar in humans (3221) and other species (range 2537-3373). Metabolite patterns were most similar within species and separated samples according to family and order. A total of 1485 chemicals were common to all species; 37% of these matched chemicals in human metabolomic databases and included chemicals in 137 out of 146 human metabolic pathways. Probability-based modularity clustering separated 644 chemicals, including many endogenous metabolites, with inter-species variation similar to intra-species variation. The remaining chemicals had greater inter-species variation and included environmental chemicals as well as GSH and methionine. Together, the data suggest that HPMP provides a platform that can be useful within human populations and controlled animal studies to simultaneously evaluate environmental exposures and biological responses to such exposures.

Indexed as

Environmental ExposureMetabolomeAnimalsCallithrixComputational BiologyHumansMacaca mulattaMiceRatsSheepSpecies SpecificitySwineToxicology

Identifiers

PMID22387982
PMCPMC3332037

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.