Evidence map›Paper›PMID 22385159›Full record

ArticleBiochemistry2012

Structural basis for calcium and phosphatidylserine regulation of phospholipase C δ1.

Jon W Lomasney, Hwei-Fang Cheng, Minae Kobayashi, Klim King

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jon W LomasneyDepartment of Pathology, Northwestern University, Chicago, Illinois 60611, United States. j-lomasney@northwestern.edu
Hwei-Fang Cheng
Minae Kobayashi
Klim King
Institute of Biomedical Sciences, Academia Sinica · TWNorthwestern University · US

Funding

Molecular Basis for Protein-Phospholipid InteractionR01HL055591 · NHLBI · NORTHWESTERN UNIVERSITY · PI LOMASNEY, JON W · 2002 to 2005
$1.2M
MOLECULAR BASIS FOR PROTEIN/PHOSPHOLIPID INTERACTIONK02HL003961 · NHLBI · NORTHWESTERN UNIVERSITY · PI LOMASNEY, JON W · 1999 to 2003
$386k
MOLECULAR BASIS FOR PROTEIN/PHOSPHOLIPID INTERACTIONR29HL055591 · NHLBI · NORTHWESTERN UNIVERSITY · PI LOMASNEY, JON W · 1996 to 2000
$49k
NHLBI NIH HHS HL 03961NHLBI NIH HHS HL 55591NHLBI NIH HHS K02 HL003961NHLBI NIH HHS R01 HL055591NHLBI NIH HHS R29 HL055591
6 · The paper itself

Abstract

Many membrane-associated enzymes, including those of the phospholipase C (PLC) superfamily, are regulated by specific interactions with lipids. Previously, we have shown that the C2 domain of PLC δ1 is required for phosphatidylserine (PS)-dependent enzyme activation and that activation requires the presence of Ca(2+). To identify the site of interaction and the role of Ca(2+) in the activation mechanism, we mutagenized three highly conserved Ca(2+) binding residues (Asp-653, Asp-706, and Asp-708) to Gly in the C2 domain of PLC δ1. The PS-dependent Ca(2+) binding affinities of the mutant enzymes D653G, D706G, and D708G were reduced by 1 order of magnitude, and the maximal level of Ca(2+) binding was reduced to half of that of the native enzyme. The level of Ca(2+)-dependent PS binding was also reduced in the mutant enzymes. Under basal conditions, the Ca(2+) dependence and the maximal level of hydrolysis of phosphatidylinositol 4,5-bisphosphate were not altered in the mutants. However, the Ca(2+)-dependent PS stimulation was severely defective. PS reduces the K(m) of the native enzyme almost 20-fold, but far less for the mutants. Replacing Asp-653, Asp-706, and Asp-708 simultaneously with glycine in the C2 domain of PLC δ1 leads to a complete and selective loss of the stimulation and binding by PS. These results show that D653, D706, and D708 are required for Ca(2+) binding in the C2 domain and demonstrate a mechanism by which C2 domains can mediate regulation of enzyme activity by specific lipid ligands.

Indexed as

Aspartic AcidBinding SitesCalciumHydrolysisKineticsLigandsModels, MolecularPhosphatidylinositolsPhosphatidylserinesPhospholipase C deltaAspartic AcidCalciumLigandsPhosphatidylinositolsPhosphatidylserinesPhospholipase C delta

Identifiers

PMID22385159
PMCPMC3356995
OpenAlexW2087651066

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.