Evidence map›Paper›PMID 22384269›Full record

ArticlePloS one2012

Sigma E regulators control hemolytic activity and virulence in a shrimp pathogenic Vibrio harveyi.

Pimonsri Rattanama, Janelle R Thompson, Natthawan Kongkerd, Kanchana Srinitiwarawong, Varaporn Vuddhakul, John J Mekalanos

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Features of Hemolysin Biosynthesis by Morganella morganii.Bulletin of experimental biology and medicine · 2023
    Article
  5. Article
  6. Article
  7. Novel Insight into the Effects of CpxR onInternational journal of molecular sciences · 2021
    Article
  8. Article
  9. Article
  10. Metabolites · 2020
    Article
  11. Characterization of the hemolytic activity ofMicrobiology (Reading, England) · 2020
    Article
  12. Article
  13. Article
  14. Comparative Genome Analysis of UropathogenicFrontiers in cellular and infection microbiology · 2019
    Article
  15. Article
  16. Discovery ofInternational journal of molecular sciences · 2018
    Article
  17. The CpxA/CpxR Two-Component System Affects Biofilm Formation and Virulence inFrontiers in cellular and infection microbiology · 2018
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Pimonsri RattanamaDepartment of Microbiology, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, Thailand.
Janelle R Thompson
Natthawan Kongkerd
Kanchana Srinitiwarawong
Varaporn Vuddhakul
John J Mekalanos
Prince of Songkla University · THHarvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Members of the genus Vibrio are important marine and aquaculture pathogens. Hemolytic activity has been identified as a virulence factor in many pathogenic vibrios including V. cholerae, V. parahaemolyticus, V. alginolyticus, V. harveyi and V. vulnificus. We have used transposon mutagenesis to identify genes involved in the hemolytic activity of shrimp-pathogenic V. harveyi strain PSU3316. Out of 1,764 mutants screened, five mutants showed reduced hemolytic activity on sheep blood agar and exhibited virulence attenuation in shrimp (Litopenaeus vannamei). Mutants were identified by comparing transposon junction sequences to a draft of assembly of the PSU3316 genome. Surprisingly none of the disrupted open reading frames or gene neighborhoods contained genes annotated as hemolysins. The gene encoding RseB, a negative regulator of the sigma factor (σ(E)), was interrupted in 2 out of 5 transposon mutants, in addition, the transcription factor CytR, a threonine synthetase, and an efflux-associated cytoplasmic protein were also identified. Knockout mutations introduced into the rpoE operon at the rseB gene exhibited low hemolytic activity in sheep blood agar, and were 3-to 7-fold attenuated for colonization in shrimp. Comparison of whole cell extracted proteins in the rseB mutant (PSU4030) to the wild-type by 2-D gel electrophoresis revealed 6 differentially expressed proteins, including two down-regulated porins (OmpC-like and OmpN) and an upregulated protease (DegQ) which have been associated with σ(E) in other organisms. Our study is the first report linking hemolytic activity to the σ(E) regulators in pathogenic Vibrio species and suggests expression of this virulence-linked phenotype is governed by multiple regulatory pathways within the V. harveyi.

Indexed as

AnimalsBacterial ProteinsBase SequenceBinding, CompetitiveDNA Transposable ElementsEscherichia coli ProteinsGenomeHemolysin ProteinsHemolysisMolecular Sequence DataMutagenesisMutationOpen Reading FramesPenaeidaePorinsSerine EndopeptidasesBacterial ProteinsDegQ protein, E coliDNA Transposable ElementsEscherichia coli ProteinsHemolysin ProteinsOmpC proteinompN protein, E coliPorinspro-sigmaE protein, Bacillus subtilisSerine EndopeptidasesSigma Factorsporulation-specific sigma factors

Identifiers

PMID22384269
PMCPMC3285676
OpenAlexW2122042017

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.