Evidence map›Paper›PMID 22384149›Full record

SynthesisPloS one2012

A survey of genomic studies supports association of circadian clock genes with bipolar disorder spectrum illnesses and lithium response.

Michael J McCarthy, Caroline M Nievergelt, John R Kelsoe, David K Welsh

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed, 2 pooled it
8.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 2 syntheses or guidelines pooled it, 170 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Adhesion G protein-coupled receptors.Pharmacological reviews · 2026
    Review
  6. Article
  7. Review
  8. Article
  9. Review
  10. Review
  11. Article
  12. Special Issue "Pathophysiology and Treatment of Alzheimer's Disease".International journal of molecular sciences · 2024
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
  19. Review
  20. Article

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Michael J McCarthyVeterans Affairs San Diego Healthcare System, San Diego, California, United Sates of America. mmccarthy@ucsd.edu
Caroline M Nievergelt
John R Kelsoe
David K Welsh
University of California, San Diego · USVA San Diego Healthcare System · US

Funding

Pharmacogenomics of Mood Stabilizer Response in Bipolar DisorderU01MH092758 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KELSOE, JOHN R. · 2010 to 2014
$6.2M
Genomic Association Study of Bipolar DisorderR01MH078151 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KELSOE, JOHN R. · 2007 to 2009
$5.5M
Genomic Predictors of Combat Stress Vulnerability and ResilienceR01MH093500 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI NIEVERGELT, CAROLINE M · 2011 to 2013
$2.7M
Circadian Clock Cells: Autonomy Persistence and Calcium DependenceR01MH082945 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WELSH, DAVID K · 2008 to 2012
$1.8M
Genetic Predictors of Lithium Response in Bipolar DisorderI01CX000363 · VA · VA SAN DIEGO HEALTHCARE SYSTEM · PI KELSOE, JOHN R. · 2011 to 2015
–
Circadian Clock Genes in Bipolar DisorderIK2BX001275 · VA · VA SAN DIEGO HEALTHCARE SYSTEM · PI MCCARTHY, MICHAEL JOSEPH · 2012 to 2016
–
BLRD VA IK2 BX001275CSRD VA I01 CX000363NIMH NIH HHS 1R01MH082945MNIMH NIH HHS MH078151NIMH NIH HHS MH092758NIMH NIH HHS MH92758NIMH NIH HHS R01 MH078151NIMH NIH HHS R01 MH082945NIMH NIH HHS R01 MH093500NIMH NIH HHS U01 MH092758
6 · The paper itself

Abstract

Circadian rhythm abnormalities in bipolar disorder (BD) have led to a search for genetic abnormalities in circadian "clock genes" associated with BD. However, no significant clock gene findings have emerged from genome-wide association studies (GWAS). At least three factors could account for this discrepancy: complex traits are polygenic, the organization of the clock is more complex than previously recognized, and/or genetic risk for BD may be shared across multiple illnesses. To investigate these issues, we considered the clock gene network at three levels: essential "core" clock genes, upstream circadian clock modulators, and downstream clock controlled genes. Using relaxed thresholds for GWAS statistical significance, we determined the rates of clock vs. control genetic associations with BD, and four additional illnesses that share clinical features and/or genetic risk with BD (major depression, schizophrenia, attention deficit/hyperactivity). Then we compared the results to a set of lithium-responsive genes. Associations with BD-spectrum illnesses and lithium-responsiveness were both enriched among core clock genes but not among upstream clock modulators. Associations with BD-spectrum illnesses and lithium-responsiveness were also enriched among pervasively rhythmic clock-controlled genes but not among genes that were less pervasively rhythmic or non-rhythmic. Our analysis reveals previously unrecognized associations between clock genes and BD-spectrum illnesses, partly reconciling previously discordant results from past GWAS and candidate gene studies.

Indexed as

GenomicsAnimalsBipolar DisorderCircadian ClocksCircadian RhythmCLOCK ProteinsDatabases, GeneticGenome-Wide Association StudyHaplotypesHumansLithiumMiceModels, GeneticOligonucleotide Array Sequence AnalysisRiskCLOCK ProteinsLithium

Identifiers

PMID22384149
PMCPMC3285204
OpenAlexW2041687701

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.