Evidence map›Paper›PMID 22383045›Full record

ArticleThe Journal of membrane biology2012

Effect of simultaneously replacing putative TM6 and TM12 of human NBCe1-A with those from NBCn1 on surface abundance in Xenopus oocytes.

Li-Ming Chen, Xue Qin, Fraser J Moss, Ying Liu, Walter F Boron

Open access · greenAbstract read
In one paragraph

Article in The Journal of membrane biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Cation-coupled bicarbonate transporters.Comprehensive Physiology · 2014
    Review
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Li-Ming ChenDepartment of Biological Sciences, Key Laboratory of Molecular Biophysics of the Ministry of Education, College of Life Science and Technology, Huazhong University of Science & Technology, Wuhan 430074, Hubei Province, China. liming.chen@mail.hust.edu.cn
Xue Qin
Fraser J Moss
Ying Liu
Walter F Boron
Huazhong University of Science and Technology · CNUniversity School · USCase Western Reserve University · US

Funding

PH REGULATION OF EXCITABLE INVERTEBRATE CELLSR01NS018400 · NINDS · YALE UNIVERSITY · PI BORON, WALTER F · 1985 to 2012
$5.1M
Physiology of Electrogenic Na/HCO3 CotransportersR37DK030344 · NIDDK · YALE UNIVERSITY · PI BORON, WALTER F · 2002 to 2011
$3.5M
REGULATION OF INTRACELLULAR PH IN RENAL PROXIMAL TUBULER01DK030344 · NIDDK · YALE UNIVERSITY · PI BORON, WALTER F. · 1986 to 2001
$660k
NIDDK NIH HHS DK30344NIDDK NIH HHS R01 DK030344NIDDK NIH HHS R37 DK030344NINDS NIH HHS NS18400NINDS NIH HHS R01 NS018400
6 · The paper itself

Abstract

HCO₃⁻ translocation across the plasma membrane via the electrogenic Na/HCO₃⁻ cotransporter NBCe1 plays an important role in intracellular pH regulation and transepithelial HCO₃⁻ transport. However, the structural determinants of transporter function remain largely unknown. A previous study showed that the putative fourth extracellular loop (EL4) plays an essential role in determining the electrogenicity of NBCe1. In the present study, we generated eight new chimeras of human NBCe1-A and NBCn1-A. All possess the putative NBCe1 EL4 and are electrogenic. Chimera O, in which the putative sixth transmembrane segment (TM6) and EL5 through the C terminus (Ct) of NBCe1 was replaced by corresponding NBCn1 sequence, produces the smallest hyperpolarization (1-2 mV) when CO₂/HCO₃⁻ is added to the extracellular solution. Biotinylation experiments show that O has a very low abundance at the plasma membrane. However, chimeras in which we simultaneously replaced the putative TM6 and smaller subdomains of the EL5-Ct region for the NBCn1 sequence were strongly electrogenic except for chimera T, in which we replaced TM6 and TM12 of NBCe1 with the corresponding regions of NBCn1. T exhibited greatly reduced transporter surface expression compared to wild-type NBCe1-A, while retaining at least some electrogenic character. We hypothesize that putative TM6 and TM12 are part of a functional unit and that if the two TMs are replaced by those of the same transporter type, high surface expression would require that the surrounding TMs are also from the same transporter type.

Indexed as

4,4'-Diisothiocyanostilbene-2,2'-Disulfonic AcidAnimalsBiological TransportCell MembraneHumansHydrogen-Ion ConcentrationOocytesPolarographySodium-Bicarbonate SymportersXenopus laevis4,4'-Diisothiocyanostilbene-2,2'-Disulfonic AcidSLC4A4 protein, humanSLC4A7 protein, humanSodium-Bicarbonate Symporters

Identifiers

PMID22383045
PMCPMC4636127
OpenAlexW2133224997

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.