Evidence map›Paper›PMID 22373917›Full record

ArticleNucleic acids research2012

Microhomology-mediated DNA strand annealing and elongation by human DNA polymerases λ and β on normal and repetitive DNA sequences.

Emmanuele Crespan, Tibor Czabany, Giovanni Maga, Ulrich Hübscher

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Review
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  5. Review
  6. Article
  7. Polλ promotes microhomology-mediated end-joining.Nature structural & molecular biology · 2023
    Article
  8. Article
  9. Review
  10. Review
  11. A Role for Human DNA Polymerase λ in Alternative Lengthening of Telomeres.International journal of molecular sciences · 2021
    Article
  12. Article
  13. Review
  14. Review
  15. Review
  16. Review
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Emmanuele CrespanInstitute of Molecular Genetics IGM-CNR, via Abbiategrasso 207, 27100 Pavia, Italy.
Tibor Czabany
Giovanni Maga
Ulrich Hübscher
University of Zurich · CHIstituto di Genetica Molecolare · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

'Classical' non-homologous end joining (NHEJ), dependent on the Ku70/80 and the DNA ligase IV/XRCC4 complexes, is essential for the repair of DNA double-strand breaks. Eukaryotic cells possess also an alternative microhomology-mediated end-joining (MMEJ) mechanism, which is independent from Ku and DNA ligase 4/XRCC4. The components of the MMEJ machinery are still largely unknown. Family X DNA polymerases (pols) are involved in the classical NHEJ pathway. We have compared in this work, the ability of human family X DNA pols β, λ and μ, to promote the MMEJ of different model templates with terminal microhomology regions. Our results reveal that DNA pol λ and DNA ligase I are sufficient to promote efficient MMEJ repair of broken DNA ends in vitro, and this in the absence of auxiliary factors. However, DNA pol β, not λ, was more efficient in promoting MMEJ of DNA ends containing the (CAG)n triplet repeat sequence of the human Huntingtin gene, leading to triplet expansion. The checkpoint complex Rad9/Hus1/Rad1 promoted end joining by DNA pol λ on non-repetitive sequences, while it limited triplet expansion by DNA pol β. We propose a possible novel role of DNA pol β in MMEJ, promoting (CAG)n triplet repeats instability.

Indexed as

DNA End-Joining RepairCatalytic DomainCell Cycle ProteinsDNADNA-Directed DNA PolymeraseDNA Polymerase betaDNA, Single-StrandedHumansHuntingtin ProteinNerve Tissue ProteinsPhosphatesProliferating Cell Nuclear AntigenRepetitive Sequences, Nucleic AcidReplication Protein ASequence Homology, Nucleic AcidTemplates, GeneticCell Cycle ProteinsDNADNA-Directed DNA PolymeraseDNA Polymerase betaDNA polymerase beta2DNA polymerase muDNA, Single-StrandedHTT protein, humanHuntingtin ProteinNerve Tissue ProteinsPhosphatesProliferating Cell Nuclear Antigenrad9 proteinReplication Protein A

Identifiers

PMID22373917
PMCPMC3384310
OpenAlexW2012816024

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.