Evidence map›Paper›PMID 22369268›Full record

ArticleJournal of medicinal chemistry2012

Multiple determinants for selective inhibition of apicomplexan calcium-dependent protein kinase CDPK1.

Eric T Larson, Kayode K Ojo, Ryan C Murphy, Steven M Johnson, Zhongsheng Zhang, Jessica E Kim, David J Leibly, Anna M W Fox, Molly C Reid, Edward J Dale and 9 more

Open access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Protein kinases in Toxoplasma gondii.International journal for parasitology · 2021
    Review
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Bumped kinase inhibitor 1369 is effective against Cystoisospora suis in vivo and in vitro.International journal for parasitology. Drugs and drug resistance · 2019
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 1 institution in 1 country.

Eric T LarsonDepartment of Biochemistry, University of Washington, Seattle, Washington, United States.
Kayode K Ojo
Ryan C Murphy
Steven M Johnson
Zhongsheng Zhang
Jessica E Kim
David J Leibly
Anna M W Fox
Molly C Reid
Edward J Dale
B Gayani K Perera
Jae Kim
Stephen N Hewitt
Wim G J Hol
Christophe L M J Verlinde
Erkang Fan
Wesley C Van Voorhis
Dustin J Maly
Ethan A Merritt
University of Washington · US

Funding

Target Selection and Ligand DiscoveryP01AI067921 · NIAID · UNIVERSITY OF WASHINGTON · PI HOL, WILHELMUS G. J. · 2006 to 2008
$6.7M
New Molecular Probes For Protein KinasesR01GM086858 · NIGMS · UNIVERSITY OF WASHINGTON · PI MALY, DUSTIN J · 2008 to 2025
$5.5M
Calcium Dependent Protein Kinase 1 as a drug target for T. gondii and C. parvumR01AI089441 · NIAID · UNIVERSITY OF WASHINGTON · PI MERRITT, ETHAN A, PARSONS, MARILYN · 2010 to 2014
$5.0M
Glycogen Synthase Kinase-3 as a drug target for Trypanosoma bruceiR01AI080625 · NIAID · UNIVERSITY OF WASHINGTON · PI VAN VOORHIS, WESLEY C · 2009 to 2012
$1.5M
NIAID NIH HHS P01 AI067921NIAID NIH HHS R01AI067921NIAID NIH HHS R01 AI080625NIAID NIH HHS R01AI080625NIAID NIH HHS R01 AI089441NIGMS NIH HHS R01 GM086858NIGMS NIH HHS R01GM086858
6 · The paper itself

Abstract

Diseases caused by the apicomplexan protozoans Toxoplasma gondii and Cryptosporidium parvum are a major health concern. The life cycle of these parasites is regulated by a family of calcium-dependent protein kinases (CDPKs) that have no direct homologues in the human host. Fortuitously, CDPK1 from both parasites contains a rare glycine gatekeeper residue adjacent to the ATP-binding pocket. This has allowed creation of a series of C3-substituted pyrazolopyrimidine compounds that are potent inhibitors selective for CDPK1 over a panel of human kinases. Here we demonstrate that selectivity is further enhanced by modification of the scaffold at the C1 position. The explanation for this unexpected result is provided by crystal structures of the inhibitors bound to CDPK1 and the human kinase c-SRC. Furthermore, the insight gained from these studies was applied to transform an alternative ATP-competitive scaffold lacking potency and selectivity for CDPK1 into a low nanomolar inhibitor of this enzyme with no activity against SRC.

Indexed as

Models, MolecularAntiprotozoal AgentsBenzimidazolesCalciumCryptosporidium parvumHumansMolecular StructureProtein Kinase InhibitorsProtein KinasesProtozoan ProteinsStructure-Activity RelationshipToxoplasmaAntiprotozoal AgentsBenzimidazolesCalciumProtein Kinase InhibitorsProtein KinasesProtozoan Proteins

Identifiers

PMID22369268
PMCPMC3336864
OpenAlexW2071301856

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.