Evidence map›Paper›PMID 22369147›Full record

ArticleJournal of medicinal chemistry2012

3-aminopiperidine-based peptide analogues as the first selective noncovalent inhibitors of the bacterial cysteine protease IdeS.

Kristina Berggren, Reine Vindebro, Claes Bergström, Christian Spoerry, Helena Persson, Tomas Fex, Jan Kihlberg, Ulrich von Pawel-Rammingen, Kristina Luthman

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Kristina BerggrenDepartment of Chemistry, Medicinal Chemistry, University of Gothenburg, SE-412 96 Göteborg, Sweden.
Reine Vindebro
Claes Bergström
Christian Spoerry
Helena Persson
Tomas Fex
Jan Kihlberg
Ulrich von Pawel-Rammingen
Kristina Luthman

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A series of eight peptides corresponding to the amino acid sequence of the hinge region of IgG and 17 newly synthesized peptide analogues containing a piperidine moiety as a replacement of a glycine residue were tested as potential inhibitors of the bacterial IgG degrading enzyme of Streptococcus pyogenes , IdeS. None of the peptides showed any inhibitory activity of IdeS, but several piperidine-based analogues were identified as inhibitors. Two different analysis methods were used: an SDS-PAGE based assay to detect IgG cleavage products and a surface plasmon resonance spectroscopy based assay to quantify the degree of inhibition. To investigate the selectivity of the inhibitors for IdeS, all compounds were screened against two other related cysteine proteases (SpeB and papain). The selectivity results show that larger analogues that are active inhibitors of IdeS are even more potent as inhibitors of papain, whereas smaller analogues that are active inhibitors of IdeS inhibit neither SpeB nor papain. Two compounds were identified that exhibit high selectivity against IdeS and will be used for further studies.

Indexed as

Amino Acid SequenceAnti-Bacterial AgentsBacterial ProteinsCysteine Proteinase InhibitorsElectrophoresis, Polyacrylamide GelEnzyme AssaysExotoxinsImmunoglobulin GMolecular Sequence DataPapainPeptidomimeticsPiperidinesStereoisomerismStreptococcus pyogenesStructure-Activity RelationshipSurface Plasmon ResonanceAnti-Bacterial AgentsBacterial ProteinsCysteine Proteinase Inhibitorserythrogenic toxinExotoxinsImmunoglobulin GMac-1-like protein, StreptococcusPapainPeptidomimeticsPiperidines

Identifiers

PMID22369147
PMCPMC3310199

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.