Evidence map›Paper›PMID 22369123›Full record

ArticleBMC genetics2012

Late blight resistance gene from Solanum ruiz-ceballosii is located on potato chromosome X and linked to violet flower colour.

Jadwiga Sliwka, Henryka Jakuczun, Marcin Chmielarz, Agnieszka Hara-Skrzypiec, Iga Tomczyńska, Andrzej Kilian, Ewa Zimnoch-Guzowska

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In one paragraph

Article in BMC genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. QTL for tuber morphology traits in diploid potato.Journal of applied genetics · 2018
    Article
  8. Article
  9. Two differentStudies in mycology · 2018
    Article
  10. Review
  11. Article
  12. Mapping of quantitative trait loci for tuber starch and leaf sucrose contents in diploid potato.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016
    Article
  13. Review
  14. Article
  15. QTL mapping in autotetraploids using SNP dosage information.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2014
    Article
  16. Article
  17. Review
  18. Novel candidate genesMolecular breeding : new strategies in plant improvement
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jadwiga SliwkaPlant Breeding and Acclimatization Institute-National Research Institute, Młochów Research Centre, Młochów, Poland. j.sliwka@ihar.edu.pl
Henryka Jakuczun
Marcin Chmielarz
Agnieszka Hara-Skrzypiec
Iga Tomczyńska
Andrzej Kilian
Ewa Zimnoch-Guzowska

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPhytophthora infestans (Mont.) de Bary, the causal organism of late blight, is economically the most important pathogen of potato and resistance against it has been one of the primary goals of potato breeding. Some potentially durable, broad-spectrum resistance genes against this disease have been described recently. However, to obtain durable resistance in potato cultivars more genes are needed to be identified to realize strategies such as gene pyramiding or use of genotype mixtures based on diverse genes.

resultsA major resistance gene, Rpi-rzc1, against P. infestans originating from Solanum ruiz-ceballosii was mapped to potato chromosome X using Diversity Array Technology (DArT) and sequence-specific PCR markers. The gene provided high level of resistance in both detached leaflet and tuber slice tests. It was linked, at a distance of 3.4 cM, to violet flower colour most likely controlled by the previously described F locus. The marker-trait association with the closest marker, violet flower colour, explained 87.1% and 85.7% of variance, respectively, for mean detached leaflet and tuber slice resistance. A genetic linkage map that consisted of 1,603 DArT markers and 48 reference sequence-specific PCR markers of known chromosomal localization with a total map length of 1204.8 cM was constructed.

conclusionsThe Rpi-rzc1 gene described here can be used for breeding potatoes resistant to P. infestans and the breeding process can be expedited using the molecular markers and the phenotypic marker, violet flower colour, identified in this study. Knowledge of the chromosomal localization of Rpi-rzc1 can be useful for design of gene pyramids. The genetic linkage map constructed in this study contained 1,149 newly mapped DArT markers and will be a valuable resource for future mapping projects using this technology in the Solanum genus.

Indexed as

Genes, PlantPhytophthora infestansBreedingChromosome MappingDisease ResistanceFlowersGenetic MarkersInfectionsPlant DiseasesQuantitative Trait LociSolanumSolanum tuberosumGenetic Markers

Identifiers

PMID22369123
PMCPMC3347998

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.