Evidence map›Paper›PMID 22363705›Full record

ArticlePloS one2012

Identification of mammalian protein quality control factors by high-throughput cellular imaging.

Gianluca Pegoraro, Ty C Voss, Scott E Martin, Pinar Tuzmen, Rajarshi Guha, Tom Misteli

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  5. Article
  6. Article
  7. Deep Imaging: the next frontier in microscopy.Histochemistry and cell biology · 2014
    Review
  8. Review
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Gianluca PegoraroCell Biology of Genomes, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States of America.
Ty C Voss
Scott E Martin
Pinar Tuzmen
Rajarshi Guha
Tom Misteli
National Institutes of Health · USHigh Throughput Biology (United States) · USNational Cancer Institute · USTranslational Therapeutics (United States) · US

Funding

NIH Chemical Genomics CenterZIBTR000004 · NCATS · NATIONAL CENTER FOR ADVANCING TRANSLATIONAL SCIENCES · PI MCKEW, JOHN · 2012 to 2014
$52.3M
Nuclear Architecture and DiseaseZIABC010309 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MISTELI, THOMAS A · 2009 to 2025
$39.8M
Intramural NIH HHS
6 · The paper itself

Abstract

Protein Quality Control (PQC) pathways are essential to maintain the equilibrium between protein folding and the clearance of misfolded proteins. In order to discover novel human PQC factors, we developed a high-content, high-throughput cell-based assay to assess PQC activity. The assay is based on a fluorescently tagged, temperature sensitive PQC substrate and measures its degradation relative to a temperature insensitive internal control. In a targeted screen of 1591 siRNA genes involved in the Ubiquitin-Proteasome System (UPS) we identified 25 of the 33 genes encoding for 26S proteasome subunits and discovered several novel PQC factors. An unbiased genome-wide siRNA screen revealed the protein translation machinery, and in particular the EIF3 translation initiation complex, as a novel key modulator of misfolded protein stability. These results represent a comprehensive unbiased survey of human PQC components and establish an experimental tool for the discovery of genes that are required for the degradation of misfolded proteins under conditions of proteotoxic stress.

Indexed as

AllelesAnimalsAntigens, Polyomavirus TransformingBiological AssayEukaryotic Initiation Factor-3Gene SilencingGenome, HumanGreen Fluorescent ProteinsHigh-Throughput Screening AssaysHumansImaging, Three-DimensionalMammalsMolecular ChaperonesProteasome Endopeptidase ComplexProtein FoldingProteinsAntigens, Polyomavirus Transformingenhanced green fluorescent proteinEukaryotic Initiation Factor-3Green Fluorescent ProteinsMolecular ChaperonesProteasome Endopeptidase Complexproteasome maturation proteinProteinsRecombinant Fusion ProteinsRNA, Small InterferingUbiquitin

Identifiers

PMID22363705
PMCPMC3282772
OpenAlexW2162103954

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.