Evidence map›Paper›PMID 22363126›Full record

ArticleWorld journal of gastroenterology2012

Study on RIZ1 gene promoter methylation status in human esophageal squamous cell carcinoma.

Shang-Wen Dong, Peng Zhang, Yi-Mei Liu, Yuan-Tao Cui, Shuo Wang, Shao-Jie Liang, Zhun He, Pei Sun, Yuan-Guo Wang

Open access · hybridAbstract read
In one paragraph

Article in World journal of gastroenterology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
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  10. Construction of PR domain eukaryotic expression vector and its inhibitory effect on esophageal cancer cells.Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Shang-Wen DongDepartment of Cardiothoracic Surgery, Tianjin Medical University General Hospital, Tianjin 300052, China.
Peng Zhang
Yi-Mei Liu
Yuan-Tao Cui
Shuo Wang
Shao-Jie Liang
Zhun He
Pei Sun
Yuan-Guo Wang
Tianjin Medical University General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo investigate the promoter region methylation status of retinoblastoma protein-interacting zinc finger gene 1 (RIZ1) in the human esophageal squamous cell carcinoma (ESCC) cell lines and tissues and verify the relationship between methylation of RIZ1 and oncogenesis, tumor progression and metastasis etc of ESCC.

methodsMethylation-specific polymerase chain reaction (MSP) was used to investigate the promoter region methylation status of RIZ1 in 6 ESCC cell lines. One cell line where RIZ1 promoter region methylation was detected was selected for the next study, where the cell line was treated with 5-aza-CdR. Real-time polymerase chain reaction was used to investigate its influence on the transcription of RIZ1. Experiments using frozen pathological specimens from 47 ESCC patients were performed using the same MSP methodology.

resultsPromoter methylation of RIZ1 gene was detected in TE13, CaEs17 and EC109 cell lines and the cell line TE13 was chosen for further study. The expression of RIZ1 mRNA in TE-13 was up-regulated after treatment with 5-aza-CdR. The rate of methylation in carcinomas tissues was significantly higher than those in matched neighboring normal and distal ending normal tissue, and the deviation of data was statistically significant (χ(2) = 24.136, P < 0.01). Analysis of the gender, age familial history, tumour deviation, tumour saturation, lymph gland displacement and clinical staging of 47 samples from ESCC patients showed that the fluctuation of data was not statistically significant.

conclusionPromoter methylation may play an important role in the epigenetic silencing of RIZ1 gene expression in human ESCC. RIZ1 is considered to be a potential tumor suppressor gene and may be a biological parameter for testing early stage human ESCC.

Indexed as

DNA MethylationAntimetabolites, AntineoplasticAzacitidineBase SequenceCarcinoma, Squamous CellCell Line, TumorDNA-Binding ProteinsEpigenesis, GeneticEsophageal NeoplasmsFemaleGene SilencingHistone-Lysine N-MethyltransferaseHumansMaleMiddle AgedMolecular Sequence DataAntimetabolites, AntineoplasticAzacitidineDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseNuclear ProteinsPRDM2 protein, humanTranscription FactorsEsophageal squamous cell carcinomaMethylation-specific polymerase chain reactionPromoter methylationRetinoblastoma protein-interacting zinc finger gene 1Tumor suppressor genes

Identifiers

PMID22363126
PMCPMC3280405
OpenAlexW2044417339

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.