Evidence map›Paper›PMID 22362773›Full record

ArticleThe Journal of biological chemistry2012

Mapping precursor-binding site on TatC subunit of twin arginine-specific protein translocase by site-specific photo cross-linking.

Stefan Zoufaly, Julia Fröbel, Patrick Rose, Tobias Flecken, Carlo Maurer, Michael Moser, Matthias Müller

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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  10. Archaeal cell surface biogenesis.FEMS microbiology reviews · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stefan ZoufalyInstitute of Biochemistry and Molecular Biology, Zentrum für Biochemie und Molekulare Zellforschung (ZBMZ), University of Freiburg, 79104 Freiburg, Germany.
Julia Fröbel
Patrick Rose
Tobias Flecken
Carlo Maurer
Michael Moser
Matthias Müller

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A number of secreted precursor proteins of bacteria, archaea, and plant chloroplasts stand out by a conserved twin arginine-containing sequence motif in their signal peptides. Many of these precursor proteins are secreted in a completely folded conformation by specific twin arginine translocation (Tat) machineries. Tat machineries are high molecular mass complexes consisting of two types of membrane proteins, a hexahelical TatC protein, and usually one or two single-spanning membrane proteins, called TatA and TatB. TatC has previously been shown to be involved in the recognition of twin arginine signal peptides. We have performed an extensive site-specific cross-linking analysis of the Escherichia coli TatC protein under resting and translocating conditions. This strategy allowed us to map the recognition site for twin arginine signal peptides to the cytosolic N-terminal region and first cytosolic loop of TatC. In addition, discrete contact sites between TatC, TatB, and TatA were revealed. We discuss a tentative model of how a twin arginine signal sequence might be accommodated in the Tat translocase.

Indexed as

Amino Acid SequenceArginineBinding SitesCross-Linking ReagentsCytosolEscherichia coliEscherichia coli ProteinsMembrane Transport ProteinsMolecular Sequence DataProtein Structure, TertiarySubstrate SpecificityArginineCross-Linking ReagentsEscherichia coli ProteinsMembrane Transport ProteinsSufI protein, E coliTatA protein, E coliTatB protein, E coliTatC protein, E coli

Identifiers

PMID22362773
PMCPMC3339946

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.