Evidence map›Paper›PMID 22362511›Full record

ArticleEcotoxicology (London, England)2012

Hepatic proteome changes in Solea senegalensis exposed to contaminated estuarine sediments: a laboratory and in situ survey.

Pedro M Costa, Eduardo Chicano-Gálvez, Sandra Caeiro, Jorge Lobo, Marta Martins, Ana M Ferreira, Miguel Caetano, Carlos Vale, José Alhama-Carmona, Juan Lopez-Barea and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Ecotoxicology (London, England), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Proteomic changes in Corbicula fluminea exposed to wastewater from a psychiatric hospital.Environmental science and pollution research international · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Pedro M CostaDepartamento de Ciências e Engenharia do Ambiente, Faculdade de Ciências e Tecnologia da, IMAR-Instituto do Mar, Universidade Nova de Lisboa, Caparica, Portugal. pmcosta@fct.unl.pt
Eduardo Chicano-Gálvez
Sandra Caeiro
Jorge Lobo
Marta Martins
Ana M Ferreira
Miguel Caetano
Carlos Vale
José Alhama-Carmona
Juan Lopez-Barea
T Angel DelValls
Maria H Costa
Instituto de Investigacao das Pescas e do Mar · PTUniversidade Nova de Lisboa · PTUniversity of Córdoba · ESUniversidad de Cádiz · ESUniversidade Aberta · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Assessing toxicity of contaminated estuarine sediments poses a challenge to ecotoxicologists due to the complex geochemical nature of sediments and to the combination of multiple classes of toxicants. Juvenile Senegalese soles were exposed for 14 days in the laboratory and in situ (field) to sediments from three sites (a reference plus two contaminated) of a Portuguese estuary. Sediment characterization confirmed the combination of metals, polycyclic aromatic hydrocarbons and organochlorines in the two contaminated sediments. Changes in liver cytosolic protein regulation patterns were determined by a combination of two-dimensional electrophoresis with de novo sequencing by tandem mass spectrometry. From the forty-one cytosolic proteins found to be deregulated, nineteen were able to be identified, taking part in multiple cellular processes such as anti-oxidative defence, energy production, proteolysis and contaminant catabolism (especially oxidoreductase enzymes). Besides a clear distinction between animals exposed to the reference and contaminated sediments, differences were also observed between laboratory- and in situ-tested fish. Soles exposed in the laboratory to the contaminated sediments failed to induce, or even markedly down-regulated, many proteins, with the exception of a peroxiredoxin (an anti-oxidant enzyme) and a few others, when compared to reference fish. In situ exposure to the contaminated sediments revealed significant up-regulation of basal metabolism-related enzymes, comparatively to the reference condition. Down-regulation of basal metabolism enzymes, related to energy production and gene transcription, in fish exposed in the laboratory to the contaminated sediments, may be linked to sediment-bound contaminants and likely compromised the organisms' ability to deploy adequate responses against insult.

Indexed as

AnimalsBiological AssayDown-RegulationEnvironmental MonitoringFlatfishesGeologic SedimentsLiverPolycyclic Aromatic HydrocarbonsProteolysisProteomeProteomicsUp-RegulationWater Pollutants, ChemicalPolycyclic Aromatic HydrocarbonsProteomeWater Pollutants, Chemical

Identifiers

PMID22362511
OpenAlexW2090086082

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.