Evidence map›Paper›PMID 22357931›Full record

ArticleDevelopment (Cambridge, England)2012

Evolution of self-organisation in Dictyostelia by adaptation of a non-selective phosphodiesterase and a matrix component for regulated cAMP degradation.

Yoshinori Kawabe, Karin E Weening, Jacques Marquay-Markiewicz, Pauline Schaap

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. From environmental sensing to developmental control: cognitive evolution in dictyostelid social amoebas.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  7. Article
  8. Evolution of multicellularity in Dictyostelia.The International journal of developmental biology · 2019
    Review
  9. Article
  10. Article
  11. Evolution of developmental signalling in Dictyostelid social amoebas.Current opinion in genetics & development · 2016
    Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. The Amoebozoa.Methods in molecular biology (Clifton, N.J.) · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Yoshinori KawabeCollege of Life Sciences, University of Dundee, Dundee, UK.
Karin E Weening
Jacques Marquay-Markiewicz
Pauline Schaap
University of Dundee · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D013453/1Biotechnology and Biological Sciences Research Council BB/E016308/1Biotechnology and Biological Sciences Research Council BB/G020426/1Wellcome TrustWellcome Trust 090276
6 · The paper itself

Abstract

Dictyostelium discoideum amoebas coordinate aggregation and morphogenesis by secreting cyclic adenosine monophosphate (cAMP) pulses that propagate as waves through fields of cells and multicellular structures. To retrace how this mechanism for self-organisation evolved, we studied the origin of the cAMP phosphodiesterase PdsA and its inhibitor PdiA, which are essential for cAMP wave propagation. D. discoideum and other species that use cAMP to aggregate reside in group 4 of the four major groups of Dictyostelia. We found that groups 1-3 express a non-specific, low affinity orthologue of PdsA, which gained cAMP selectivity and increased 200-fold in affinity in group 4. A low affinity group 3 PdsA only partially restored aggregation of a D. discoideum pdsA-null mutant, but was more effective at restoring fruiting body morphogenesis. Deletion of a group 2 PdsA gene resulted in disruption of fruiting body morphogenesis, but left aggregation unaffected. Together, these results show that groups 1-3 use a low affinity PdsA for morphogenesis that is neither suited nor required for aggregation. PdiA belongs to a family of matrix proteins that are present in all Dictyostelia and consist mainly of cysteine-rich repeats. However, in its current form with several extensively modified repeats, PdiA is only present in group 4. PdiA is essential for initiating spiral cAMP waves, which, by organising large territories, generate the large fruiting structures that characterise group 4. We conclude that efficient cAMP-mediated aggregation in group 4 evolved by recruitment and adaptation of a non-selective phosphodiesterase and a matrix component into a system for regulated cAMP degradation.

Indexed as

3',5'-Cyclic-AMP PhosphodiesterasesCloning, MolecularCyclic AMPCysteineDevelopmental BiologyDictyosteliumGene Expression Regulation, DevelopmentalGenetic Complementation TestModels, BiologicalPhenotypePhylogenyPromoter Regions, GeneticProtein IsoformsProtein Structure, Tertiary3',5'-Cyclic-AMP PhosphodiesterasesCyclic AMPCysteineProtein Isoforms

Identifiers

PMID22357931
PMCPMC3294436
OpenAlexW2165476600

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.