Evidence map›Paper›PMID 22357847›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2012

RAE-1, a novel PHR binding protein, is required for axon termination and synapse formation in Caenorhabditis elegans.

Brock Grill, Lizhen Chen, Erik D Tulgren, Scott T Baker, Willy Bienvenut, Matthew Anderson, Manfredo Quadroni, Yishi Jin, Craig C Garner

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 46 citations in OpenAlex.

  1. Review
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  4. Advances in the understanding of nuclear pore complexes in human diseases.Journal of cancer research and clinical oncology · 2024
    Review
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  20. Nucleoporin genes in human diseases.European journal of human genetics : EJHG · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

Brock GrillDepartment of Pharmacology, University of Minnesota, Minneapolis, MN, USA. bgrill@umn.edu
Lizhen Chen
Erik D Tulgren
Scott T Baker
Willy Bienvenut
Matthew Anderson
Manfredo Quadroni
Yishi Jin
Craig C Garner
University of Minnesota · USHoward Hughes Medical Institute · USPalo Alto University · USStanford University · USUniversity of Lausanne · CH

Funding

Mechanisms of synapse formation and axon termination in C. elegansR01NS072129 · NINDS · UNIVERSITY OF MINNESOTA · PI GRILL, BROCK · 2011 to 2024
$8.0M
GABAERGIC NEURON DIFFERENTIATION IN C ELEGANSR01NS035546 · NINDS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI JIN, YISHI · 1996 to 2016
$5.3M
ASSEMBLING THE PRESYNAPTIC JUNCTION (PSJ)R01NS039471 · NINDS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GARNER, CRAIG C · 2000 to 2007
$2.4M
GABAergic Neuron Differentiation in C.elegansR37NS035546 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI JIN, YISHI · 2017 to 2021
$2.4M
NINDS NIH HHS R01 NS035546NINDS NIH HHS R01 NS039471NINDS NIH HHS R01 NS072129NINDS NIH HHS R37 NS035546
6 · The paper itself

Abstract

Previous studies in Caenorhabditis elegans showed that RPM-1 (Regulator of Presynaptic Morphology-1) regulates axon termination and synapse formation. To understand the mechanism of how rpm-1 functions, we have used mass spectrometry to identify RPM-1 binding proteins, and have identified RAE-1 (RNA Export protein-1) as an evolutionarily conserved binding partner. We define a RAE-1 binding region in RPM-1, and show that this binding interaction is conserved and also occurs between Rae1 and the human ortholog of RPM-1 called Pam (protein associated with Myc). rae-1 loss of function causes similar axon and synapse defects, and synergizes genetically with two other RPM-1 binding proteins, GLO-4 and FSN-1. Further, we show that RAE-1 colocalizes with RPM-1 in neurons, and that rae-1 functions downstream of rpm-1. These studies establish a novel postmitotic function for rae-1 in neuronal development.

Indexed as

Adaptor Proteins, Signal TransducingAmino Acid MotifsAmino Acid SequenceAnimalsAnimals, Genetically ModifiedAxonsCaenorhabditis elegansCaenorhabditis elegans ProteinsF-Box ProteinsGene Expression RegulationGuanine Nucleotide Exchange FactorsHumansImmunoprecipitationLuminescent ProteinsMass SpectrometryMechanoreceptorsAdaptor Proteins, Signal TransducingCaenorhabditis elegans ProteinsF-Box ProteinsFSN-1 protein, C elegansGlo-1 protein, C elegansGuanine Nucleotide Exchange FactorsLuminescent ProteinsMYCBP2 protein, humanNuclear Matrix-Associated ProteinsNucleocytoplasmic Transport Proteinsrab GTP-Binding ProteinsRAE1 protein, humanRPM-1 protein, C elegansUbiquitin-Protein Ligases

Identifiers

PMID22357847
PMCPMC3302171
OpenAlexW1972107812

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.