Evidence map›Paper›PMID 22357599›Full record

ArticleJournal of experimental botany2012

Relationship between asparagine metabolism and protein concentration in soybean seed.

Sudhakar Pandurangan, Agnieszka Pajak, Stephen J Molnar, Elroy R Cober, Sangeeta Dhaubhadel, Cinta Hernández-Sebastià, Werner M Kaiser, Randall L Nelson, Steven C Huber, Frédéric Marsolais

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 87 citations in OpenAlex.

  1. Article
  2. Article
  3. QTL mapping and multi-omics identify candidate genes for protein and oil in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
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  6. Unravelling the genetic architecture of soybean tofu quality traits.Molecular breeding : new strategies in plant improvement · 2025
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  8. Review
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  12. Article
  13. Genetic mapping and functional genomics of soybean seed protein.Molecular breeding : new strategies in plant improvement · 2023
    Article
  14. Article
  15. Article
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  17. Article
  18. Fine mapping QTL and mining genes for protein content in soybean by the combination of linkage and association analysis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Sudhakar PanduranganDepartment of Biology, University of Western Ontario, London, Ontario, N6A 5B7, Canada.
Agnieszka Pajak
Stephen J Molnar
Elroy R Cober
Sangeeta Dhaubhadel
Cinta Hernández-Sebastià
Werner M Kaiser
Randall L Nelson
Steven C Huber
Frédéric Marsolais
Agriculture and Agri-Food Canada · CAAgricultural Research Service · USLondon Research and Development CentreOttawa Research and Development CentreUnited States Department of Agriculture · USUniversity of Würzburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The relationship between asparagine metabolism and protein concentration was investigated in soybean seed. Phenotyping of a population of recombinant inbred lines adapted to Illinois confirmed a positive correlation between free asparagine levels in developing seeds and protein concentration at maturity. Analysis of a second population of recombinant inbred lines adapted to Ontario associated the elevated free asparagine trait with two of four quantitative trait loci determining population variation for protein concentration, including a major one on chromosome 20 (linkage group I) which has been reported in multiple populations. In the seed coat, levels of asparagine synthetase were high at 50 mg and progressively declined until 150 mg seed weight, suggesting that nitrogenous assimilates are pre-conditioned at early developmental stages to enable a high concentration of asparagine in the embryo. The levels of asparaginase B1 showed an opposite pattern, being low at 50 mg and progressively increased until 150 mg, coinciding with an active phase of storage reserve accumulation. In a pair of genetically related cultivars, ∼2-fold higher levels of asparaginase B1 protein and activity in seed coat, were associated with high protein concentration, reflecting enhanced flux of nitrogen. Transcript expression analyses attributed this difference to a specific asparaginase gene, ASPGB1a. These results contribute to our understanding of the processes determining protein concentration in soybean seed.

Indexed as

AsparaginaseAsparagineAspartate-Ammonia LigaseBlotting, WesternGene Expression Regulation, PlantGlycine maxInbreedingPlant ProteinsQuantitative Trait, HeritableQuantitative Trait LociRecombination, GeneticRNA, MessengerSeedsAsparaginaseAsparagineAspartate-Ammonia LigasePlant ProteinsRNA, Messenger

Identifiers

PMID22357599
PMCPMC3350928
OpenAlexW2125390368

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.