Evidence map›Paper›PMID 22355703›Full record

ArticleScientific reports2011

Uneven spread of cis- and trans-editing aminoacyl-tRNA synthetase domains within translational compartments of P. falciparum.

Sameena Khan, Arvind Sharma, Abhishek Jamwal, Vinay Sharma, Anil Kumar Pole, Kamal Kishor Thakur, Amit Sharma

Abstract read
In one paragraph

Article in Scientific reports, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Identification of Selective Novel Hits againstInternational journal of molecular sciences · 2020
    Article
  5. Conformational heterogeneity in apo and drug-bound structures of Toxoplasma gondii prolyl-tRNA synthetase.Acta crystallographica. Section F, Structural biology communications · 2019
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Translational regulation during stage transitions in malaria parasites.Annals of the New York Academy of Sciences · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sameena KhanStructural and Computational Biology Group, International Centre for Genetic Engineering and Biotechnology, New Delhi 110067, India.
Arvind Sharma
Abhishek Jamwal
Vinay Sharma
Anil Kumar Pole
Kamal Kishor Thakur
Amit Sharma

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accuracy of aminoacylation is dependent on maintaining fidelity during attachment of amino acids to cognate tRNAs. Cis- and trans-editing protein factors impose quality control during protein translation, and 8 of 36 Plasmodium falciparum aminoacyl-tRNA synthetase (aaRS) assemblies contain canonical putative editing modules. Based on expression and localization profiles of these 8 aaRSs, we propose an asymmetric distribution between the parasite cytoplasm and its apicoplast of putative editing-domain containing aaRSs. We also show that the single copy alanyl- and threonyl-tRNA synthetases are dually targeted to parasite cytoplasm and apicoplast. This bipolar presence of two unique synthetases presents opportunity for inhibitor targeting their aminoacylation and editing activities in twin parasite compartments. We used this approach to identify specific inhibitors against the alanyl- and threonyl-tRNA synthetases. Further development of such inhibitors may lead to anti-parasitics which simultaneously block protein translation in two key parasite organelles, a strategy of wider applicability for pathogen control.

Indexed as

Amino Acyl-tRNA SynthetasesAnimalsAntiparasitic AgentsCloning, MolecularCytoplasmFibroblastsGene Expression RegulationGene Expression Regulation, EnzymologicGreen Fluorescent ProteinsHeLa CellsHumansMicePlasmodium falciparumProtein Structure, TertiaryProtozoan ProteinsThreonine-tRNA LigaseAmino Acyl-tRNA SynthetasesAntiparasitic AgentsGreen Fluorescent ProteinsProtozoan ProteinsThreonine-tRNA Ligase

Identifiers

PMID22355703
PMCPMC3240968

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.