Evidence map›Paper›PMID 22355445›Full record

ArticleViruses2011

High throughput method to quantify anterior-posterior polarity of T-cells and epithelial cells.

Charletha V Irvin-Wilson, Justin Y Newberg, Kathleen Kong, Ronald T Javier, Susan J Marriott

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 88% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Charletha V Irvin-WilsonDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, USA.
Justin Y Newberg
Kathleen Kong
Ronald T Javier
Susan J Marriott
Baylor College of Medicine · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
TRANSGENIC MOUSE MODELS TO STUDY OVARIAN FUNCTIONU54HD007495 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI RICHARDS, JOANNE STEWART · 1998 to 2013
$19.9M
Research Education and Career Horizons ProgramK12GM084897 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SIFERS, RICHARD NORMAN, SLAUGHTER, GAYLE · 2008 to 2016
$8.3M
ROLE OF THE AD9 E4 REGION IN MAMMARY GLAND ONCOGENESISR01CA058541 · NCI · BAYLOR COLLEGE OF MEDICINE · PI JAVIER, RONALD T. · 1993 to 2013
$3.9M
TRANSCRIPTIONAL REGULATION OF HTLV-GENE EXPRESSIONR01CA055684 · NCI · BAYLOR COLLEGE OF MEDICINE · PI MARRIOTT, SUSAN J · 1992 to 2006
$1.2M
NCI NIH HHS P30 CA-125123NCI NIH HHS P30 CA125123NCI NIH HHS R01 CA055684NCI NIH HHS R01 CA058541NCI NIH HHS R01 CA55684NICHD NIH HHS U54 HD-007495NICHD NIH HHS U54 HD007495NIDDK NIH HHS P30 DK056338NIDDK NIH HHS P30 DK-56338NIGMS NIH HHS K12 GM084897NIGMS NIH HHS K12 GM84897
6 · The paper itself

Abstract

The virologic synapse (VS), which is formed between a virus-infected and uninfected cell, plays a central role in the transmission of certain viruses, such as HIV and HTLV-1. During VS formation, HTLV-1-infected T-cells polarize cellular and viral proteins toward the uninfected T-cell. This polarization resembles anterior-posterior cell polarity induced by immunological synapse (IS) formation, which is more extensively characterized than VS formation and occurs when a T-cell interacts with an antigen-presenting cell. One measure of cell polarity induced by both IS or VS formation is the repositioning of the microtubule organizing center (MTOC) relative to the contact point with the interacting cell. Here we describe an automated, high throughput system to score repositioning of the MTOC and thereby cell polarity establishment. The method rapidly and accurately calculates the angle between the MTOC and the IS for thousands of cells. We also show that the system can be adapted to score anterior-posterior polarity establishment of epithelial cells. This general approach represents a significant advancement over manual cell polarity scoring, which is subject to experimenter bias and requires more time and effort to evaluate large numbers of cells.

Indexed as

Cell PolarityEpithelial CellsFluorescent Antibody TechniqueHigh-Throughput Screening AssaysHumansImmunological SynapsesJurkat CellsMicrospheresMicrotubule-Organizing CenterT-Lymphocytesepithelial cellhigh throughput imagingimmunological synapsepipeline pilotpolarityT-cellvirological synapse

Identifiers

PMID22355445
PMCPMC3280515
OpenAlexW2024608758

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.