Evidence map›Paper›PMID 22355128›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Aerobic kinetoplastid flagellate Phytomonas does not require heme for viability.

Luděk Kořený, Roman Sobotka, Julie Kovářová, Anna Gnipová, Pavel Flegontov, Anton Horváth, Miroslav Oborník, Francisco J Ayala, Julius Lukeš

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
6.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Heme metabolism in Strigomonas culicis: Implications of HThe Journal of biological chemistry · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Using Diatom and Apicomplexan Models to Study the Heme Pathway ofInternational journal of molecular sciences · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. TheThe Journal of biological chemistry · 2017
    Article
  18. Article
  19. Genome ofFrontiers in microbiology · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 3 countries.

Luděk KořenýBiology Centre, Institute of Parasitology, Czech Academy of Sciences and Faculty of Science, University of South Bohemia, 370 05 České Budějovice, Czech Republic.
Roman Sobotka
Julie Kovářová
Anna Gnipová
Pavel Flegontov
Anton Horváth
Miroslav Oborník
Francisco J Ayala
Julius Lukeš
Czech Academy of Sciences, Biology Centre · CZUniversity of South Bohemia in České Budějovice · CZComenius University Bratislava · SKCzech Academy of Sciences · CZCzech Academy of Sciences, Institute of Microbiology · CZUniversity of California, Irvine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heme is an iron-coordinated porphyrin that is universally essential as a protein cofactor for fundamental cellular processes, such as electron transport in the respiratory chain, oxidative stress response, or redox reactions in various metabolic pathways. Parasitic kinetoplastid flagellates represent a rare example of organisms that depend on oxidative metabolism but are heme auxotrophs. Here, we show that heme is fully dispensable for the survival of Phytomonas serpens, a plant parasite. Seeking to understand the metabolism of this heme-free eukaryote, we searched for heme-containing proteins in its de novo sequenced genome and examined several cellular processes for which heme has so far been considered indispensable. We found that P. serpens lacks most of the known hemoproteins and does not require heme for electron transport in the respiratory chain, protection against oxidative stress, or desaturation of fatty acids. Although heme is still required for the synthesis of ergosterol, its precursor, lanosterol, is instead incorporated into the membranes of P. serpens grown in the absence of heme. In conclusion, P. serpens is a flagellate with unique metabolic adaptations that allow it to bypass all requirements for heme.

Indexed as

Crithidia fasciculataElectron TransportErgosterolFatty AcidsHemeKinetoplastidaLanosterolModels, BiologicalOxidation-ReductionOxidative StressOxygenPhylogenyPorphyrinsSterolsTrypanosomatinaErgosterolFatty AcidsHemeLanosterolOxygenPorphyrinsSterols

Identifiers

PMID22355128
PMCPMC3309753
OpenAlexW2002249679

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.