Evidence map›Paper›PMID 22354310›Full record

ArticleAntimicrobial agents and chemotherapy2012

Target- and resistance-based mechanistic studies with TP-434, a novel fluorocycline antibiotic.

Trudy H Grossman, Agata L Starosta, Corey Fyfe, William O'Brien, David M Rothstein, Aleksandra Mikolajka, Daniel N Wilson, Joyce A Sutcliffe

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 160 citations in OpenAlex.

  1. IGNITE4: Results of a Phase 3, Randomized, Multicenter, Prospective Trial of Eravacycline vs Meropenem in the Treatment of Complicated Intraabdominal Infections.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2019
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  5. The Rise in Carbapenem-ResistantPathogens (Basel, Switzerland) · 2026
    Review
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  9. Eravacycline: From broad-spectrum coverage to novel clinical applications.Revista espanola de quimioterapia : publicacion oficial de la Sociedad Espanola de Quimioterapia · 2026
    Review
  10. Article
  11. Review
  12. Screening and comparison ofFrontiers in cellular and infection microbiology · 2025
    Article
  13. Dual role ofiMetaOmics · 2024
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  17. Unveiling the Secrets ofInternational journal of molecular sciences · 2024
    Review
  18. Paenilamicins from the honey bee pathogenbioRxiv : the preprint server for biology · 2024
    Article
  19. Article
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Trudy H GrossmanTetraphase Pharmaceuticals, Inc, Watertown, Massachusetts, USA. tgrossman@tphase.com
Agata L Starosta
Corey Fyfe
William O'Brien
David M Rothstein
Aleksandra Mikolajka
Daniel N Wilson
Joyce A Sutcliffe
Tetraphase Pharmaceuticals (United States) · USCenter for Integrated Protein Science Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

TP-434 is a novel, broad-spectrum fluorocycline antibiotic with activity against bacteria expressing major antibiotic resistance mechanisms, including tetracycline-specific efflux and ribosomal protection. The mechanism of action of TP-434 was assessed using both cell-based and in vitro assays. In Escherichia coli cells expressing recombinant tetracycline resistance genes, the MIC of TP-434 (0.063 μg/ml) was unaffected by tet(M), tet(K), and tet(B) and increased to 0.25 and 4 μg/ml in the presence of tet(A) and tet(X), respectively. Tetracycline, in contrast, was significantly less potent (MIC ≥ 128 μg/ml) against E. coli cells when any of these resistance mechanisms were present. TP-434 showed potent inhibition in E. coli in vitro transcription/translation (50% inhibitory concentration [IC(50)] = 0.29 ± 0.09 μg/ml) and [(3)H]tetracycline ribosome-binding competition (IC(50) = 0.22 ± 0.07 μM) assays. The antibacterial potencies of TP-434 and all other tetracycline class antibiotics tested were reduced by 4- to 16-fold, compared to that of the wild-type control strain, against Propionibacterium acnes strains carrying a 16S rRNA mutation, G1058C, a modification that changes the conformation of the primary binding site of tetracycline in the ribosome. Taken together, the findings support the idea that TP-434, like other tetracyclines, binds the ribosome and inhibits protein synthesis and that this activity is largely unaffected by the common tetracycline resistance mechanisms.

Indexed as

Anti-Bacterial AgentsBacterial ProteinsBinding, CompetitiveEscherichia coliGene ExpressionMicrobial Sensitivity TestsMutationPropionibacterium acnesProtein BiosynthesisRibosomesRNA, Ribosomal, 16STetracyclineTetracycline ResistanceTetracyclinesTransformation, BacterialAnti-Bacterial AgentsBacterial ProteinseravacyclineRNA, Ribosomal, 16STetracyclineTetracyclines

Identifiers

PMID22354310
PMCPMC3346605
OpenAlexW2163177484

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.