Evidence map›Paper›PMID 22350151›Full record

ArticleMolecular biology reports2012

Characterization and functional analysis of methionine sulfoxide reductase A gene family in tomato.

Changbo Dai, Myeong-Hyeon Wang

Abstract read
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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Evidence for participation of the methionine sulfoxide reductase repair system in plant seed longevity.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Changbo DaiDepartment of Medical Biotechnology, College of Biomedical Science, Kangwon National University, Chuncheon, Gangwon-do, 200-701, South Korea.
Myeong-Hyeon Wang
Kangwon National University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, four methionine sulfoxide reductase A (MSRA) genes, SlMSRA2-5, were identified in Micro-Tom (Solanum lycopersicum cv.'Micro-Tom') based on the tomato database. Exon/intron distribution assays indicated that the gene sequence of SlMSRA2, SlMSRA3, and SlMSRA4 contained two exons and one intron in the tomato genome, while the coding sequence of SlMSRA5 was interrupted by three introns. Southern blot analysis revealed that the members of the MSRA family existed as low copies in the tomato genome. Although SlMSRA2 and E4 gene (one of ethylene-inducible gene) share a similarity of 93.4% in terms of their amino acid sequence, organ-specific expression revealed that gene expression were remarkably different based on Northern blot analysis. In addition, SlMSRA3 and SlMSRA4 transcripts were abundant in leaves while expression of SlMSRA5 was weak in most of organs examined. The expression pattern of SlMSRAs induced in response to hormones and stresses suggested that the tomato MSRA genes might be involved in resistance against pathogens and various abiotic stresses. In addition, kinetics parameters suggested that recombinant SlMSRA4 protein exhibited a highest affinity for dabsyl-labeled methionine sulfoxide and its catalytic efficiency (K (cat) /K (m) ) was threefold and 6.5-fold higher than that of SlMSRA2 and SlMSRA3. However, the activity of purified SlMSRA5 was not detected in the DTT-dependent reducing system.

Indexed as

Amino Acid SequenceBlotting, NorthernBlotting, SouthernChromatography, High Pressure LiquidChromatography, Reverse-PhaseElectrophoresis, Polyacrylamide GelGene Expression ProfilingGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenes, PlantKineticsMethionine Sulfoxide ReductasesMolecular Sequence DataMultigene FamilyOrgan SpecificityOxidative StressMethionine Sulfoxide ReductasesPlant Growth RegulatorsPlant Proteins

Identifiers

PMID22350151
OpenAlexW2051259339

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.