Evidence map›Paper›PMID 22348646›Full record

ArticleBreast cancer research : BCR2012

Common variants at 12p11, 12q24, 9p21, 9q31.2 and in ZNF365 are associated with breast cancer risk for BRCA1 and/or BRCA2 mutation carriers.

Antonis C Antoniou, Karoline B Kuchenbaecker, Penny Soucy, Jonathan Beesley, Xiaoqing Chen, Lesley McGuffog, Andrew Lee, Daniel Barrowdale, Sue Healey, Olga M Sinilnikova and 176 more

Open access · goldAbstract read
In one paragraph

Article in Breast cancer research : BCR, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed, 4 pooled it
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 4 syntheses or guidelines pooled it, 96 citations in OpenAlex.

  1. Pooled it
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  4. Pooled it
  5. Trial
  6. Trial
  7. Putative linkage signals identified for breast cancer in African American families.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2015
    Trial
  8. Article
  9. Article
  10. Review
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  13. Potential Role of Zinc Finger 365Iranian journal of medical sciences · 2023
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Breast Cancer-Related Low Penetrance Genes.Advances in experimental medicine and biology · 2021
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

186 authors at 20 institutions in 21 countries.

Antonis C AntoniouCentre for Cancer Genetic Epidemiology, Department of Public Health and Primary Care, University of Cambridge, Worts Causeway, Cambridge CB1 8RN, UK. antonis@srl.cam.ac.uk
Karoline B Kuchenbaecker
Penny Soucy
Jonathan Beesley
Xiaoqing Chen
Lesley McGuffog
Andrew Lee
Daniel Barrowdale
Sue Healey
Olga M Sinilnikova
Maria A Caligo
Niklas Loman
Katja Harbst
Annika Lindblom
Brita Arver
Richard Rosenquist
Per Karlsson
Kate Nathanson
Susan Domchek
Tim Rebbeck
Anna Jakubowska
Jan Lubinski
Katarzyna Jaworska
Katarzyna Durda
Elżbieta Złowowcka-Perłowska
Ana Osorio
Mercedes Durán
Raquel Andrés
Javier Benítez
Ute Hamann
Frans B Hogervorst
Theo A van Os
Senno Verhoef
Hanne E J Meijers-Heijboer
Juul Wijnen
Encarna B Gómez Garcia
Marjolijn J Ligtenberg
Mieke Kriege
J Margriet Collée
Margreet G E M Ausems
Jan C Oosterwijk
Susan Peock
Debra Frost
Steve D Ellis
Radka Platte
Elena Fineberg
D Gareth Evans
Fiona Lalloo
Chris Jacobs
Ros Eeles
Julian Adlard
Rosemarie Davidson
Trevor Cole
Jackie Cook
Joan Paterson
Fiona Douglas
Carole Brewer
Shirley Hodgson
Patrick J Morrison
Lisa Walker
Mark T Rogers
Alan Donaldson
Huw Dorkins
Andrew K Godwin
Betsy Bove
Dominique Stoppa-Lyonnet
Claude Houdayer
Bruno Buecher
Antoine de Pauw
Sylvie Mazoyer
Alain Calender
Mélanie Léoné
Brigitte Bressac-de Paillerets
Olivier Caron
Hagay Sobol
Marc Frenay
Fabienne Prieur
Sandra U Ferrer
Isabelle Mortemousque
Saundra Buys
Mary Daly
Alexander Miron
Mary U Terry
John L Hopper
Esther M John
Melissa Southey
David Goldgar
Christian F Singer
Anneliese Fink-Retter
Muy-Kheng Tea
Daphne U Kaulich
Thomas V Hansen
Finn C Nielsen
Rosa B Barkardottir
Mia Gaudet
Tomas Kirchhoff
Vijai Joseph
Ana Dutra-Clarke
Kenneth Offit
Marion Piedmonte
Judy Kirk
David Cohn
Jean Hurteau
John Byron
James Fiorica
Amanda E Toland
Marco Montagna
Cristina Oliani
Evgeny Imyanitov
Claudine Isaacs
Laima Tihomirova
Ignacio Blanco
Conxi Lazaro
Alex Teulé
J Del Valle
Simon A Gayther
Kunle Odunsi
Jenny Gross
Beth Y Karlan
Edith Olah
Soo-Hwang Teo
Patricia A Ganz
Mary S Beattie
Cecelia M Dorfling
Elizabeth U van Rensburg
Orland Diez
Ava Kwong
Rita K Schmutzler
Barbara Wappenschmidt
Christoph Engel
Alfons Meindl
Nina Ditsch
Norbert Arnold
Simone Heidemann
Dieter Niederacher
Sabine Preisler-Adams
Dorothea Gadzicki
Raymonda Varon-Mateeva
Helmut Deissler
Andrea Gehrig
Christian Sutter
Karin Kast
Britta Fiebig
Dieter Schäfer
Trinidad Caldes
Miguel de la Hoya
Heli Nevanlinna
Taru A Muranen
Bernard Lespérance
Amanda B Spurdle
Susan L Neuhausen
Yuan C Ding
Xianshu Wang
Zachary Fredericksen
Vernon S Pankratz
Noralane M Lindor
Paolo Peterlongo
Siranoush Manoukian
Bernard Peissel
Daniela Zaffaroni
Bernardo Bonanni
Loris Bernard
Riccardo Dolcetti
Laura Papi
Laura Ottini
Paolo Radice
Mark H Greene
Jennifer T Loud
Irene L Andrulis
Hilmi Ozcelik
Anna U Mulligan
Gord Glendon
Mads Thomassen
Anne-Marie Gerdes
Uffe B Jensen
Anne-Bine Skytte
Torben A Kruse
Georgia Chenevix-Trench
Fergus J Couch
Jacques Simard
Douglas F Easton
CIMBA, SWE-BRCA
HEBON
EMBRACE
GEMO Collaborators Study
kConFab Investigators
University of Cambridge · GBQIMR Berghofer Medical Research Institute · AUComprehensive Cancer Center Vienna · ATInstitut d'Investigació Biomédica de Bellvitge · ESPomeranian Medical University · PLCopenhagen University Hospital · DKFondazione IRCCS Istituto Nazionale dei Tumori · ITInserm · FRMayo Clinic in Arizona · USMemorial Sloan Kettering Cancer Center · USUniversity of Pennsylvania · USCedars-Sinai Medical Center · USCentre hospitalier universitaire de Québec · CAChristian-Albrechts-Universität zu Kiel · DECity of Hope · USErasmus MC · NLEuropean Institute of Oncology · ITFox Chase Cancer Center · USHospices Civils de Lyon · FRHospital Clínico San Carlos · ES

Funding

Clinical Genetic Studies of Familial and Hereditary Cancer SyndromesZIACP010144 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI SAVAGE, SHARON A. · 2009 to 2025
$111.8M
Tissue Culture Shared ResourceP30CA051008 · NCI · GEORGETOWN UNIVERSITY · PI STEPHEN W BYERS · 1990 to 2026
$71.5M
The Role of CHFR in Tumorigenesis and Paclitaxel-Sensitivity in Breast CancerP50CA116201 · NCI · MAYO CLINIC ROCHESTER · PI PETER C LUCAS · 2005 to 2026
$49.9M
Northern California Cooperative Family Registry for Breast CancerU01CA069417 · NCI · NORTHERN CALIFORNIA CANCER CENTER · PI JOHN, ESTHER M. · 1995 to 2010
$22.4M
METROPOLITAN NEW YORK REGISTRY OF BREAST CANCER FAMILIESU01CA069398 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI TERRY, MARY BETH · 1995 to 2010
$10.5M
ONTARIO REGISTRY FOR STUDIES OF FAMILIAL BREAST CANCERU01CA069467 · NCI · CANCER CARE ONTARIO · PI ANDRULIS, IRENE L. · 1995 to 2010
$10.4M
Philadelphia Breast Cancer Family RegistryU01CA069631 · NCI · FOX CHASE CANCER CENTER · PI DALY, MARY BERYL · 1995 to 2010
$7.4M
THE AUSTRALIAN BREAST CANCER FAMILY REGISTRYU01CA069638 · NCI · UNIVERSITY OF MELBOURNE · PI HOPPER, JOHN L · 1995 to 2010
$6.6M
A genome-wide association study for breast cancer in BRCA1 mutation carriersR01CA128978 · NCI · MAYO CLINIC ROCHESTER · PI COUCH, FERGUS JOSEPH · 2008 to 2012
$4.8M
Utah Breast Cancer Family RegistryU01CA069446 · NCI · UNIVERSITY OF UTAH · PI BUYS, SAUNDRA S · 1995 to 2010
$4.6M
GENETIC EPIDEMIOLOGY OF BREAST CANCER--BRCA1 AND BRCA2R01CA074415 · NCI · UNIVERSITY OF UTAH · PI NEUHAUSEN, SUSAN L. · 1998 to 2007
$3.9M
Cancer Research UK 10118Cancer Research UK 11022Cancer Research UK 11174Cancer Research UK 15007Cancer Research UK C12292/A11174Cancer Research UK C1287/A10118Cancer Research UK C1287/A11990Cancer Research UK C5047/A8385NCI NIH HHS CA- 06-503NCI NIH HHS CA116201NCI NIH HHS CA128978NCI NIH HHS P30 CA051008NCI NIH HHS P30-CA051008NCI NIH HHS P50 CA116201NCI NIH HHS R01 CA128978NCI NIH HHS R01 CA74415NCI NIH HHS RFA-CA-06-503NCI NIH HHS U01 CA69398NCI NIH HHS U01 CA69417NCI NIH HHS U01 CA69446NCI NIH HHS U01 CA69467NCI NIH HHS U01 CA69631NCI NIH HHS U01 CA69638
6 · The paper itself

Abstract

introductionSeveral common alleles have been shown to be associated with breast and/or ovarian cancer risk for BRCA1 and BRCA2 mutation carriers. Recent genome-wide association studies of breast cancer have identified eight additional breast cancer susceptibility loci: rs1011970 (9p21, CDKN2A/B), rs10995190 (ZNF365), rs704010 (ZMIZ1), rs2380205 (10p15), rs614367 (11q13), rs1292011 (12q24), rs10771399 (12p11 near PTHLH) and rs865686 (9q31.2).

methodsTo evaluate whether these single nucleotide polymorphisms (SNPs) are associated with breast cancer risk for BRCA1 and BRCA2 carriers, we genotyped these SNPs in 12,599 BRCA1 and 7,132 BRCA2 mutation carriers and analysed the associations with breast cancer risk within a retrospective likelihood framework.

resultsOnly SNP rs10771399 near PTHLH was associated with breast cancer risk for BRCA1 mutation carriers (per-allele hazard ratio (HR) = 0.87, 95% CI: 0.81 to 0.94, P-trend = 3 × 10-4). The association was restricted to mutations proven or predicted to lead to absence of protein expression (HR = 0.82, 95% CI: 0.74 to 0.90, P-trend = 3.1 × 10-5, P-difference = 0.03). Four SNPs were associated with the risk of breast cancer for BRCA2 mutation carriers: rs10995190, P-trend = 0.015; rs1011970, P-trend = 0.048; rs865686, 2df-P = 0.007; rs1292011 2df-P = 0.03. rs10771399 (PTHLH) was predominantly associated with estrogen receptor (ER)-negative breast cancer for BRCA1 mutation carriers (HR = 0.81, 95% CI: 0.74 to 0.90, P-trend = 4 × 10-5) and there was marginal evidence of association with ER-negative breast cancer for BRCA2 mutation carriers (HR = 0.78, 95% CI: 0.62 to 1.00, P-trend = 0.049).

conclusionsThe present findings, in combination with previously identified modifiers of risk, will ultimately lead to more accurate risk prediction and an improved understanding of the disease etiology in BRCA1 and BRCA2 mutation carriers.

Indexed as

HeterozygoteAdultAgedBRCA1 ProteinBRCA2 ProteinChromosomes, Human, Pair 12Chromosomes, Human, Pair 9DNA-Binding ProteinsFemaleGenetic Association StudiesHereditary Breast and Ovarian Cancer SyndromeHumansMiddle AgedPolymorphism, Single NucleotideRisk FactorsTranscription FactorsBRCA1 ProteinBRCA1 protein, humanBRCA2 ProteinBRCA2 protein, humanDNA-Binding ProteinsTranscription FactorsZNF365 protein, human

Identifiers

PMID22348646
PMCPMC3496151
OpenAlexW2110899026

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.