Evidence map›Paper›PMID 22347378›Full record

ArticlePloS one2012

A genome-wide collection of Mos1 transposon insertion mutants for the C. elegans research community.

Elodie Vallin, Joseph Gallagher, Laure Granger, Edwige Martin, Jérôme Belougne, Julien Maurizio, Yohann Duverger, Sarah Scaglione, Caroline Borrel, Elisabeth Cortier and 6 more

Abstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
  2. Article
  3. An efficient negative selection marker formicroPublication biology · 2022
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  8. Article
  9. G3 (Bethesda, Md.) · 2019
    Article
  10. TheGenetics · 2019
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Targeted genome engineering inCell & bioscience · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Elodie VallinCentre de Génétique et de Physiologie Moléculaires et Cellulaires, CNRS UMR 5534, Campus de la Doua, Villeurbanne, France.
Joseph Gallagher
Laure Granger
Edwige Martin
Jérôme Belougne
Julien Maurizio
Yohann Duverger
Sarah Scaglione
Caroline Borrel
Elisabeth Cortier
Karima Abouzid
Maité Carre-Pierrat
Kathrin Gieseler
Laurent Ségalat
Patricia E Kuwabara
Jonathan J Ewbank

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methods that use homologous recombination to engineer the genome of C. elegans commonly use strains carrying specific insertions of the heterologous transposon Mos1. A large collection of known Mos1 insertion alleles would therefore be of general interest to the C. elegans research community. We describe here the optimization of a semi-automated methodology for the construction of a substantial collection of Mos1 insertion mutant strains. At peak production, more than 5,000 strains were generated per month. These strains were then subject to molecular analysis, and more than 13,300 Mos1 insertions characterized. In addition to targeting directly more than 4,700 genes, these alleles represent the potential starting point for the engineered deletion of essentially all C. elegans genes and the modification of more than 40% of them. This collection of mutants, generated under the auspices of the European NEMAGENETAG consortium, is publicly available and represents an important research resource.

Indexed as

DNA-Binding ProteinsDNA Transposable ElementsRecombination, GeneticTransposasesAnimalsAnimals, Genetically ModifiedCaenorhabditis elegansGenetic EngineeringGenomeHomologous RecombinationMutagenesis, InsertionalResearchDNA-Binding ProteinsDNA Transposable Elementsmariner transposasesTransposases

Identifiers

PMID22347378
PMCPMC3275553

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.