Evidence map›Paper›PMID 22344702›Full record

ArticleDrug metabolism and disposition: the biological fate of chemicals2012

Identification of the residue in human CYP3A4 that is covalently modified by bergamottin and the reactive intermediate that contributes to the grapefruit juice effect.

Hsia-Lien Lin, Cesar Kenaan, Paul F Hollenberg

Open access · bronzeAbstract read
In one paragraph

Article in Drug metabolism and disposition: the biological fate of chemicals, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 61 citations in OpenAlex.

  1. Trial
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  8. Parallel evolution of UbiA superfamily proteins into aromaticProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  9. Review
  10. Antioxidants (Basel, Switzerland) · 2020
    Article
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  20. Mechanism-based inactivation of human cytochrome P450 3A4 by two piperazine-containing compounds.Drug metabolism and disposition: the biological fate of chemicals · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Hsia-Lien LinDepartment of Pharmacology, University of Michigan, Ann Arbor, Michigan 48109-5632, USA.
Cesar Kenaan
Paul F Hollenberg
University of Michigan–Ann Arbor · US

Funding

HEMOPROTEIN-CATALYZED OXYGENATIONS OF CARCINOGENSR01CA016954 · NCI · WAYNE STATE UNIVERSITY · PI HOLLENBERG, PAUL F. · 1986 to 2011
$4.3M
HEMOPROTEIN-CATALYZED OXYGENATIONS OF CARCINOGENSR37CA016954 · NCI · WAYNE STATE UNIVERSITY · PI HOLLENBERG, PAUL F. · 1988 to 1995
–
NCI NIH HHS CA16954NCI NIH HHS R01 CA016954
6 · The paper itself

Abstract

Previous studies have demonstrated that bergamottin (BG), a component of grapefruit juice, is a mechanism-based inactivator of CYP3A4 and contributes, in part, to the grapefruit juice-drug interaction. Although the covalent binding of [(14)C]BG to the CYP3A4 apoprotein has been demonstrated by SDS-polyacrylamide gel electrophoresis, the identity of the modified amino acid residue and the reactive intermediate species of BG responsible for the inactivation have not been reported. In the present study, we show that inactivation of CYP3A4 by BG results in formation of a modified apoprotein-3A4 and a GSH conjugate, both exhibiting mass increases of 388 Da, which corresponds to the mass of 6',7'-dihydroxybergamottin (DHBG), a metabolite of BG, plus one oxygen atom. To identify the adducted residue, BG-inactivated 3A4 was digested with trypsin, and the digests were then analyzed by liquid chromatography-tandem mass spectrometry (MS/MS). A mass shift of 388 Da was used for the SEQUEST database search, which revealed a mass increase of 388 Da for the peptide with the sequence (272)LQLMIDSQNSK(282), and MS/MS analysis of the adducted peptide demonstrated that Gln273 is the residue modified. Mutagenesis studies showed that the Gln273 to Val mutant was resistant to inactivation by BG and DHBG and did not generate two of the major metabolites of BG formed by 3A4 wild type. In conclusion, we have determined that the reactive intermediate, oxygenated DHBG, covalently binds to Gln273 and thereby contributes to the mechanism-based inactivation of CYP3A4 by BG.

Indexed as

BeveragesCitrus paradisiCytochrome P-450 CYP3A InhibitorsFood-Drug InteractionsAmino Acid SubstitutionApoenzymesBinding SitesChromatography, LiquidCytochrome P-450 CYP3AElectrophoresis, Polyacrylamide GelEscherichia coliFurocoumarinsGlutathioneHumansMutagenesis, Site-DirectedPlasmidsApoenzymesbergamottinCYP3A4 protein, humanCytochrome P-450 CYP3ACytochrome P-450 CYP3A InhibitorsFurocoumarinsGlutathione

Identifiers

PMID22344702
PMCPMC3336797
OpenAlexW2111891818

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.