Evidence map›Paper›PMID 22344232›Full record

ReviewClinical cancer research : an official journal of the American Association for Cancer Research2012

Molecular pathways: pathogenesis and clinical implications of microbiome alteration in esophagitis and Barrett esophagus.

Liying Yang, Fritz Francois, Zhiheng Pei

Registry-linked trialAbstract readReview
In one paragraph

Review in Clinical cancer research : an official journal of the American Association for Cancer Research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT05412628 (Investigating the Association, Disease Mechanism, and Clinical Application Between Microbiota and Oropharyngeal and Esophageal Cancer), which is not on this map. Cited by 104 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
104citing papers in PubMed, 1 pooled it
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05412628 naunknown statusnot on this mapstarted 2022, after this paper: background citation

Investigating the Association, Disease Mechanism, and Clinical Application Between Microbiota and Oropharyngeal and Esophageal Cancer

TypeinterventionalSponsorNational Cheng-Kung University HospitalRan2022 to 2024Enrolled60ConditionsMicrobial Colonization, Esophageal Cancer, Oropharyngeal Neoplasms, Synchronous NeoplasmArmsOral swab test
3 · Its place in the literature

Who cites it

104 citing papers in PubMed, 1 synthesis or guideline pooled it, 197 citations in OpenAlex.

  1. Pooled it
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44 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Liying YangDepartment of Medicine and Pathology, New York University School of Medicine, New York, New York 10010, USA.
Fritz Francois
Zhiheng Pei
New York University · USVA NY Harbor Healthcare System · US

Funding

The Proteomic and Functional Profile of HIV Positive SalivaU19DE018385 · NIDCR · NEW YORK UNIVERSITY · PI MALAMUD, DANIEL · 2007 to 2014
$6.6M
Foregut microbiome in development of esophageal adenocarcinomaUH3CA140233 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NELSON, KAREN E., PEI, ZHIHENG · 2010 to 2014
$6.1M
The Oral Microbiome and Upper Aerodigestive Squamous Cell CancerR01CA159036 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI AHN, JIYOUNG, HAYES, RICHARD BERNARD · 2011 to 2024
$3.5M
Etiology &pathogenesis of chronic tonsillar hypertrophyR01AI063477 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI PEI, ZHIHENG · 2005 to 2009
$1.6M
Foregut microbiome in development of esophageal adenocarcinomaUH2CA140233 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NELSON, KAREN E., PEI, ZHIHENG · 2009 to 2009
$1.1M
H. PYLORI AND IL-1Beta IN ESOPHAGEAL ONCOGENESISK23CA107123 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI FRANCOIS, FRITZ · 2004 to 2008
$691k
NCI NIH HHS K23 CA107123NCI NIH HHS K23CA107123NCI NIH HHS R01 CA159036NCI NIH HHS R01CA159036NCI NIH HHS UH2 CA140233NCI NIH HHS UH3 CA140233NCI NIH HHS UH3CA140233NIAID NIH HHS R01 AI063477NIAID NIH HHS R01AI063477NIDCR NIH HHS U19 DE018385NIDCR NIH HHS U19DE018385
6 · The paper itself

Abstract

Esophageal adenocarcinoma is preceded by the development of reflux-related intestinal metaplasia or Barrett esophagus, which is a response to inflammation of the esophageal squamous mucosa, reflux esophagitis. Gastroesophageal reflux impairs the mucosal barrier in the distal esophagus, allowing chronic exposure of the squamous epithelium to the diverse microbial ecosystem or microbiome and inducing chronic inflammation. The esophageal microbiome is altered in both esophagitis and Barrett esophagus, characterized by a significant decrease in gram-positive bacteria and an increase in gram-negative bacteria in esophagitis and Barrett esophagus. Lipopolysaccharides (LPS), a major structure of the outer membrane in gram-negative bacteria, can upregulate gene expression of proinflammatory cytokines via activation of the Toll-like receptor 4 and NF-κB pathway. The potential impact of LPS on reflux esophagitis may be through relaxation of the lower esophageal sphincter via inducible nitric oxide synthase and by delaying gastric emptying via cyclooxygenase-2. Chronic inflammation may play a critical role in the progression from benign to malignant esophageal disease. Therefore, analysis of the pathways leading to chronic inflammation in the esophagus may help to identify biomarkers in patients with Barrett esophagus for neoplastic progression and provide insight into molecular events suitable for therapeutic intervention in prevention of esophageal adenocarcinoma development in patients with reflux esophagitis and Barrett esophagus.

Indexed as

MetagenomeAdenocarcinomaBarrett EsophagusCyclooxygenase 2Cyclooxygenase 2 InhibitorsCytokinesDisease ProgressionEsophageal NeoplasmsEsophagitisEsophagusGastroesophageal RefluxHumansInflammationLipopolysaccharidesNF-kappa BNitric Oxide Synthase Type IICyclooxygenase 2Cyclooxygenase 2 InhibitorsCytokinesLipopolysaccharidesNF-kappa BNitric Oxide Synthase Type IIToll-Like Receptor 4

Identifiers

PMID22344232
PMCPMC3725293
OpenAlexW2113345423

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.