Evidence map›Paper›PMID 22343297›Full record

ArticleJournal of bacteriology2012

Transcriptional organization and physiological contributions of the relQ operon of Streptococcus mutans.

Jeong Nam Kim, Sang-Joon Ahn, Kinda Seaton, Steven Garrett, Robert A Burne

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Microorganisms · 2022
    Article
  4. Article
  5. Peptides encoded in theMicrobiology (Reading, England) · 2020
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. CcpA and CodY Coordinate Acetate Metabolism in Streptococcus mutans.Applied and environmental microbiology · 2017
    Article
  11. Article
  12. Article
  13. Article
  14. Manganese uptake and streptococcal virulence.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2015
    Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Jeong Nam KimDepartment of Oral Biology, University of Florida, College of Dentistry, Gainesville, Florida, USA.
Sang-Joon Ahn
Kinda Seaton
Steven Garrett
Robert A Burne
Florida College · USUniversity of Florida · US

Funding

Comprehensive Training Program in Oral BiologyT90DE021990 · NIDCR · UNIVERSITY OF FLORIDA · PI Jose A Lemos · 2011 to 2026
$8.2M
GENETICS AND PHYSIOLOGY OF ORAL BIOFILMSR01DE013239 · NIDCR · UNIVERSITY OF ROCHESTER · PI BURNE, ROBERT A · 1999 to 2019
$6.6M
NIDCR NIH HHS DE13239NIDCR NIH HHS R01 DE013239NIDCR NIH HHS T90 DE021990
6 · The paper itself

Abstract

The molecular alarmone (p)ppGpp functions as a global regulator of gene expression in bacteria. In Streptococcus mutans, (p)ppGpp synthesis is catalyzed by three gene products: RelA, RelP, and RelQ. RelA is responsible for (p)ppGpp production during a stringent response, and RelP is the primary source of (p)ppGpp during exponential growth, but the role of RelQ has not been thoroughly investigated. In this study, we analyzed the four-gene relQ operon to establish how these gene products may affect homeostasis and stress tolerance in the dental caries pathogen S. mutans. Northern blotting and reverse transcriptase PCR demonstrated that relQ is cotranscribed with the downstream genes ppnK (NAD kinase), rluE (pseudouridine synthase), and pta (phosphotransacetylase). In addition, a promoter located within the rluE gene was shown to drive transcription of pta. Inactivation of relQ, ppnK, or rluE did not significantly affect growth of or stress tolerance by S. mutans, whereas strains lacking pta were more sensitive to acid and oxidative stresses. Interestingly, introduction of an rluE deletion into the pta mutant reversed the deleterious effects of the pta mutation on growth and stress tolerance. Accumulation of (p)ppGpp was also decreased in a pta mutant strain, whereas inactivation of relQ caused enhanced (p)ppGpp synthesis in exponential-phase cells. The results reveal an important role for the relQ operon in the expression of traits that are essential for persistence and pathogenesis by S. mutans and provide evidence for a molecular connection of acetate and (p)ppGpp metabolism with tolerance of acid and oxidative stresses.

Indexed as

Bacterial ProteinsBiofilmsGene DeletionGene Expression Regulation, BacterialGenes, ReporterOperonPromoter Regions, GeneticStreptococcus mutansTime FactorsTranscription, GeneticBacterial Proteins

Identifiers

PMID22343297
PMCPMC3318469
OpenAlexW2075729584

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.