Evidence map›Paper›PMID 22343000›Full record

ArticleBiochimica et biophysica acta2012

Down-regulation of MutS homolog 3 by hypoxia in human colorectal cancer.

Jie Li, Junichi Koike, Hiroyuki Kugoh, Michitsune Arita, Takahito Ohhira, Yoshinori Kikuchi, Kimihiko Funahashi, Ken Takamatsu, C Richard Boland, Minoru Koi and 1 more

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Licochalcone A InhibitsInternational journal of molecular sciences · 2020
    Article
  2. Review
  3. Article
  4. Review
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Jie LiDepartment of Molecular Biology, Toho University School of Medicine, Tokyo, Japan.
Junichi Koike
Hiroyuki Kugoh
Michitsune Arita
Takahito Ohhira
Yoshinori Kikuchi
Kimihiko Funahashi
Ken Takamatsu
C Richard Boland
Minoru Koi
Hiromichi Hemmi
Toho University · JPBaylor University Medical Center · USTottori University · JP

Funding

The Biology and Diagnosis of HNPCCR01CA072851 · NCI · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI GOEL, AJAY · 1996 to 2019
$6.6M
NCI NIH HHS R01 CA072851NCI NIH HHS R01 CA72851
6 · The paper itself

Abstract

Down-regulation of hMSH3 is associated with elevated microsatellite alterations at selected tetranucleotide repeats and low levels of microsatellite instability in colorectal cancer (CRC). However, the mechanism that down-regulates hMSH3 in CRC is not known. In this study, a significant association between over-expression of glucose transporter 1, a marker for hypoxia, and down-regulation of hMSH3 in CRC tissues was observed. Therefore, we examined the effect of hypoxia on the expression of hMSH3 in human cell lines. When cells with wild type p53 (wt-p53) were exposed to hypoxia, rapid down-regulation of both hMSH2 and hMSH3 occurred. In contrast, when null or mutated p53 (null/mut-p53) cells were exposed to hypoxia, only hMSH3 was down-regulated, and at slower rate than wt-p53 cells. Using a reporter assay, we found that disruption of the two putative hypoxia response elements (HREs) located within the promoter region of the hMSH3 abrogated the suppressive effect of hypoxia on reporter activity regardless of p53 status. In an EMSA, two different forms of HIF-1α complexes that specifically bind to these HREs were detected. A larger complex containing HIF-1α predominantly bound to the HREs in hypoxic null/mut-p53 cells whereas a smaller complex predominated in wt-p53 cells. Finally, HIF-1α knockdown by siRNA significantly inhibited down-regulation of hMSH3 by hypoxia in both wt-p53 and mut-p53 cells. Taken together, our results suggest that the binding of HIF-1α complexes to HRE sites is necessary for down-regulation of hMSH3 in both wt-p53 and mut-p53 cells.

Indexed as

Base SequenceCell HypoxiaCell Line, TumorColorectal NeoplasmsDNA-Binding ProteinsDown-RegulationGene Expression Regulation, NeoplasticGenes, ReporterGlucose Transporter Type 1HumansHypoxia-Inducible Factor 1, alpha SubunitMolecular Sequence DataMutS Homolog 3 ProteinPromoter Regions, GeneticProtein BindingResponse ElementsDNA-Binding ProteinsGlucose Transporter Type 1Hypoxia-Inducible Factor 1, alpha SubunitMSH3 protein, humanMutS Homolog 3 ProteinSLC2A1 protein, humanTumor Suppressor Protein p53

Identifiers

PMID22343000
PMCPMC3793328
OpenAlexW1972325598

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.