Evidence map›Paper›PMID 22338691›Full record

ArticleJournal of synchrotron radiation2012

TXM-Wizard: a program for advanced data collection and evaluation in full-field transmission X-ray microscopy.

Yijin Liu, Florian Meirer, Phillip A Williams, Junyue Wang, Joy C Andrews, Piero Pianetta

Abstract read
In one paragraph

Article in Journal of synchrotron radiation, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 60 papers.

0numbers the graph read from it
0cells of the map it votes in
60citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

60 citing papers in PubMed.

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  18. Two Pathways for the Degradation of Orpiment Pigment (AsJournal of the American Chemical Society · 2023
    Article
  19. Surface coating by mechanofusion modulates bulk charging pathways and battery performance of Ni-rich layered cathodes.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yijin LiuStanford Synchrotron Radiation Lightsource, SLAC National Accelerator Laboratory, 2575 Sand Hill Road, Menlo Park, CA 94025, USA.
Florian Meirer
Phillip A Williams
Junyue Wang
Joy C Andrews
Piero Pianetta

Funding

Multi-keV x-ray microscopy facility for bio-imagingR01EB004321 · NIBIB · STANFORD UNIVERSITY · PI PIANETTA, PIERO A · 2005 to 2008
$2.4M
NIBIB NIH HHS 5F01EB004321NIBIB NIH HHS R01 EB004321
6 · The paper itself

Abstract

Transmission X-ray microscopy (TXM) has been well recognized as a powerful tool for non-destructive investigation of the three-dimensional inner structure of a sample with spatial resolution down to a few tens of nanometers, especially when combined with synchrotron radiation sources. Recent developments of this technique have presented a need for new tools for both system control and data analysis. Here a software package developed in MATLAB for script command generation and analysis of TXM data is presented. The first toolkit, the script generator, allows automating complex experimental tasks which involve up to several thousand motor movements. The second package was designed to accomplish computationally intense tasks such as data processing of mosaic and mosaic tomography datasets; dual-energy contrast imaging, where data are recorded above and below a specific X-ray absorption edge; and TXM X-ray absorption near-edge structure imaging datasets. Furthermore, analytical and iterative tomography reconstruction algorithms were implemented. The compiled software package is freely available.

Indexed as

Data CollectionElectron Probe MicroanalysisImage Processing, Computer-AssistedImaging, Three-DimensionalSoftwareSynchrotronsTomography, X-Ray ComputedX-Ray Absorption Spectroscopy

Identifiers

PMID22338691
PMCPMC3284347

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.