Evidence map›Paper›PMID 22334676›Full record

ArticleThe Journal of biological chemistry2012

Structural basis for specific recognition of Rpt1p, an ATPase subunit of 26 S proteasome, by proteasome-dedicated chaperone Hsm3p.

Kenji Takagi, Sangwoo Kim, Haruka Yukii, Mika Ueno, Ryo Morishita, Yaeta Endo, Koichi Kato, Keiji Tanaka, Yasushi Saeki, Tsunehiro Mizushima

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Plasticity in the structure and assembly of proteasomes.The Journal of biological chemistry · 2026
    Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Development of a cell-free protein synthesis system for practical use.Proceedings of the Japan Academy. Series B, Physical and biological sciences · 2021
    Article
  10. Review
  11. Article
  12. Review
  13. Review
  14. Proteasome Structure and Assembly.Journal of molecular biology · 2017
    Review
  15. Article
  16. Article
  17. Proteasome assembly.Cellular and molecular life sciences : CMLS · 2014
    Review
  18. Article
  19. 1.15 Å resolution structure of the proteasome-assembly chaperone Nas2 PDZ domain.Acta crystallographica. Section F, Structural biology communications · 2014
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kenji TakagiPicobiology Institute, Department of Life Science, Graduate School of Life Science, University of Hyogo, 3-2-1, Kouto, Kamigori-cho, Ako-gun, Hyogo, 678-1297, Japan.
Sangwoo Kim
Haruka Yukii
Mika Ueno
Ryo Morishita
Yaeta Endo
Koichi Kato
Keiji Tanaka
Yasushi Saeki
Tsunehiro Mizushima

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 26 S proteasome is a 2.5-MDa molecular machine that degrades ubiquitinated proteins in eukaryotic cells. It consists of a proteolytic core particle and two 19 S regulatory particles (RPs) composed of 6 ATPase (Rpt) and 13 non-ATPase (Rpn) subunits. Multiple proteasome-dedicated chaperones facilitate the assembly of the proteasome, but little is known about the detailed mechanisms. Hsm3, a 19 S RP dedicated chaperone, transiently binds to the C-terminal domain of the Rpt1 subunit and forms a tetrameric complex, Hsm3-Rpt1-Rpt2-Rpn1, during maturation of the ATPase ring of 19 S RP. To elucidate the structural basis of Hsm3 function, we determined the crystal structures of Hsm3 and its complex with the C-terminal domain of the Rpt1 subunit (Rpt1C). Hsm3 has a C-shaped structure that consists of 11 HEAT repeats. The structure of the Hsm3-Rpt1C complex revealed that the interacting surface between Hsm3 and Rpt1 is a hydrophobic core and a complementary charged surface. Mutations in the Hsm3-Rpt1 surface resulted in the assembly defect of the 26 S proteasome. Furthermore, a structural model of the Hsm3-Rpt ring complex and an in vitro binding assay suggest that Hsm3 can bind Rpt2 in addition to Rpt1. Collectively, our results provide the structural basis of the molecular functions of Hsm3 for the RP assembly.

Indexed as

Saccharomyces cerevisiaeAdenosine TriphosphatasesAmino Acid SubstitutionBinding SitesCrystallography, X-RayModels, MolecularMolecular ChaperonesMutagenesis, Site-DirectedProteasome Endopeptidase ComplexProtein BindingProtein Interaction Domains and MotifsProtein MultimerizationProtein Structure, QuaternaryProtein Structure, SecondarySaccharomyces cerevisiae ProteinsSurface PropertiesAdenosine TriphosphatasesATP dependent 26S proteaseHSM3 protein, S cerevisiaeMolecular ChaperonesProteasome Endopeptidase ComplexRPT1 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID22334676
PMCPMC3320968

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.