Evidence map›Paper›PMID 22334513›Full record

ArticleChembiochem : a European journal of chemical biology2012

Detection of early Abl kinase activation after ionizing radiation by using a peptide biosensor.

Jiabin Tang, Jean Y Wang, Laurie L Parker

Open access · greenAbstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jiabin TangDepartment of Medicinal Chemistry and Molecular Pharmacology, College of Pharmacy, Center for Cancer Research, Purdue University, West Lafayette, IN 47907, USA.
Jean Y Wang
Laurie L Parker
Purdue University West Lafayette · USUniversity of California, San Diego · US

Funding

STRUCTURE AND FUNCTION OF THE C-ABL PROTO-ONCOPROTEINR01CA043054 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI WANG, JEAN Y.J. · 1986 to 2018
$4.4M
Biosensor design for detection and analysis of complex signal patterns in cancerR00CA127161 · NCI · PURDUE UNIVERSITY · PI PARKER, LAURIE L. · 2010 to 2012
$785k
Biosensor design for detection and analysis of complex signal patterns in cancerK99CA127161 · NCI · PURDUE UNIVERSITY · PI PARKER, LAURIE L. · 2008 to 2009
$279k
NCI NIH HHS CA127161NCI NIH HHS K99 CA127161NCI NIH HHS R00 CA127161NCI NIH HHS R01 CA043054
6 · The paper itself

Abstract

The ubiquitously expressed Abl protein is a non-receptor tyrosine kinase that undergoes nuclear-cytoplasmic shuttling and is involved in many signaling pathways in the cell. Nuclear Abl is activated by DNA damage to regulate DNA repair, cell-cycle checkpoints and apoptosis. Previous studies have established that ataxia telangiectasia mutated (ATM) activates nuclear Abl by phosphorylating serine 465 (S465) in the kinase domain in response to ionizing radiation (IR). Using a peptide biosensor that specifically reports on the Abl kinase activity, we found that an Abl-S465A mutant, which is not capable of being activated by ATM through the canonical site, was still activated rapidly after IR. We established that DNA-dependent protein kinase (DNAPK) is likely to be responsible for a second pathway to activate Abl early on in the response to IR through phosphorylation at a site other than S465. Our findings show that nuclear and cytoplasmic Abl kinase is activated early on (within 5 min) in response to IR by both ATM and DNAPK, and that although one or the other of these kinases is required, either one is sufficient to activate Abl. These results support the concept of early Abl recruitment by both the ATM and the DNAPK pathways to regulate nuclear events triggered by DNA damage and potentially communicate them to proteins in the cytoplasm.

Indexed as

Infrared RaysBenzamidesBiosensing TechniquesCells, CulturedDNA DamageEnzyme ActivationHEK293 CellsHumansImatinib MesylateMorpholinesPeptidesPhosphorylationPiperazinesProto-Oncogene Proteins c-ablPyrimidinesPyrones2-morpholin-4-yl-6-thianthren-1-yl-pyran-4-oneBenzamidesImatinib MesylateMorpholinesPeptidesPiperazinesProto-Oncogene Proteins c-ablPyrimidinesPyronesSerine

Identifiers

PMID22334513
PMCPMC3429332
OpenAlexW2030317870

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.