Evidence map›Paper›PMID 22333951›Full record

ArticleGastroenterology2012

Vacuolating cytotoxin and variants in Atg16L1 that disrupt autophagy promote Helicobacter pylori infection in humans.

Deepa Raju, Seamus Hussey, Michelle Ang, Mauricio R Terebiznik, Michal Sibony, Esther Galindo-Mata, Vijay Gupta, Steven R Blanke, Alberto Delgado, Judith Romero-Gallo and 13 more

Abstract read
In one paragraph

Article in Gastroenterology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed, 1 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 1 synthesis or guideline pooled it, 243 citations in OpenAlex.

  1. Mucosal immune response in biology, disease prevention and treatment.Signal transduction and targeted therapy · 2025
    Pooled it
  2. Internalization ofAnnals of medicine · 2026
    Review
  3. Review
  4. Article
  5. Biomolecules · 2026
    Review
  6. Review
  7. Article
  8. Review
  9. JGH open : an open access journal of gastroenterology and hepatology · 2025
    Review
  10. Inflammasomes and autophagy in cancer: unlocking targeted therapies.Naunyn-Schmiedeberg's archives of pharmacology · 2025
    Review
  11. Review
  12. Article
  13. Review
  14. Autophagy and its role in gastrointestinal diseases.World journal of gastroenterology · 2024
    Article
  15. Review
  16. An antibiotic-free platform for eliminating persistentActa pharmaceutica Sinica. B · 2024
    Article
  17. Exploring the Link betweenAntibiotics (Basel, Switzerland) · 2024
    Review
  18. Review
  19. Review
  20. Programmed cell death inFrontiers in cellular and infection microbiology · 2024
    Review

67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

23 authors at 9 institutions in 5 countries.

Deepa RajuCell Biology Program, Research Institute, Hospital for Sick Children, Toronto, Ontario, Canada.
Seamus Hussey
Michelle Ang
Mauricio R Terebiznik
Michal Sibony
Esther Galindo-Mata
Vijay Gupta
Steven R Blanke
Alberto Delgado
Judith Romero-Gallo
Mahendra Singh Ramjeet
Heidi Mascarenhas
Richard M Peek
Pelayo Correa
Cathy Streutker
Georgina Hold
Erdmutte Kunstmann
Tamotsu Yoshimori
Mark S Silverberg
Stephen E Girardin
Dana J Philpott
Emad El Omar
Nicola L Jones
University of Toronto · CAVanderbilt University Medical Center · USHospital for Sick Children · CAMount Sinai Hospital · CAUniversity of Aberdeen · GBUniversity of Illinois Urbana-Champaign · USOsaka University · JPPraxis für Humangenetik · DESt. Michael's Hospital · CA

Funding

Role of Iron and B-Catenin Activation in Gastric CarcinogenesisP01CA116087 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2009 to 2026
$27.5M
H.Pylori Relationship to Digestive Diseases and CancerR01CA077955 · NCI · VANDERBILT UNIVERSITY MEDICAL CENTER · PI RICHARD M. PEEK · 2003 to 2026
$9.7M
Helicobacter Pylori and Gastrointestinal BiologyR01DK058587 · NIDDK · VANDERBILT UNIVERSITY MEDICAL CENTER · PI PEEK, RICHARD M. · 2001 to 2024
$7.8M
MOLECULAR MECHANISMS OF THE H. PYLORI VACUOLATING TOXINR01AI045928 · NIAID · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI BLANKE, STEVEN R. · 2000 to 2010
$1.9M
H PYLORI RELATIONSHIP TO DIGESTIVE DISEASES AND CANCERR29CA077955 · NCI · VANDERBILT UNIVERSITY · PI PEEK, RICHARD M · 1997 to 2001
$294k
Cancer Research UK C8969/A6657CIHR 178886NCI NIH HHS CA116037NCI NIH HHS CA77955NCI NIH HHS P01 CA116087NCI NIH HHS R01 CA077955NCI NIH HHS R29 CA077955NIAID NIH HHS R01 AI045928NIAID NIH HHS R01AI045928NIDDK NIH HHS DK 58587NIDDK NIH HHS R01 DK058587
6 · The paper itself

Abstract

BACKGROUND &

aimsThe Helicobacter pylori toxin vacuolating cytotoxin (VacA) promotes gastric colonization, and its presence (VacA(+)) is associated with more-severe disease. The exact mechanisms by which VacA contributes to infection are unclear. We previously found that limited exposure to VacA induces autophagy of gastric cells, which eliminates the toxin; we investigated whether autophagy serves as a defense mechanism against H pylori infection.

methodsWe investigated the effect of VacA on autophagy in human gastric epithelial cells and primary gastric cells from mice. Expression of p62, a marker of autophagy, was also assessed in gastric tissues from patients infected with toxigenic (VacA(+)) or nontoxigenic strains. We analyzed the effect of VacA on autophagy in peripheral blood monocytes obtained from subjects with different genotypes of ATG16L1, which regulates autophagy. We performed genotyping for ATG16L1 in 2 cohorts of infected and uninfected subjects.

resultsProlonged exposure of human gastric epithelial cells and mouse gastric cells to VacA disrupted induction of autophagy in response to the toxin, because the cells lacked cathepsin D in autophagosomes. Loss of autophagy resulted in the accumulation of p62 and reactive oxygen species. Gastric biopsy samples from patients infected with VacA(+), but not nontoxigenic strains of H pylori, had increased levels of p62. Peripheral blood monocytes isolated from individuals with polymorphisms in ATG16L1 that increase susceptibility to Crohn's disease had reduced induction of autophagy in response to VacA(+) compared to cells from individuals that did not have these polymorphisms. The presence of the ATG16L1 Crohn's disease risk variant increased susceptibility to H pylori infection in 2 separate cohorts.

conclusionsAutophagy protects against infection with H pylori; the toxin VacA disrupts autophagy to promote infection, which could contribute to inflammation and eventual carcinogenesis.

Indexed as

Helicobacter pyloriAllelesAnimalsAutophagyBacterial ProteinsCathepsin DCrohn DiseaseGenotypeHelicobacter InfectionsHumansImmunity, InnateMicePhagosomesBacterial ProteinsCathepsin DVacA protein, Helicobacter pylori

Identifiers

PMID22333951
PMCPMC3336037
OpenAlexW1986802187

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.