Evidence map›Paper›PMID 22332634›Full record

ArticleThe Biochemical journal2012

An inactivating caspase 11 passenger mutation originating from the 129 murine strain in mice targeted for c-IAP1.

Niall S Kenneth, J Michael Younger, Elizabeth D Hughes, Danielle Marcotte, Philip A Barker, Thomas L Saunders, Colin S Duckett

Open access · hybridAbstract read
In one paragraph

Article in The Biochemical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed, 1 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Inflammasome, pyroptosis, and cytokines in myocardial ischemia-reperfusion injury.American journal of physiology. Heart and circulatory physiology · 2018
    Review
  9. Article
  10. Review
  11. Review
  12. Review
  13. Article
  14. Article
  15. Response to Heard et al.The EMBO journal · 2015
    Article
  16. Article
  17. Article
  18. Revisiting caspases in sepsis.Cell death & disease · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Niall S KennethDepartment of Pathology, University of Michigan, Ann Arbor, MI 48109, USA.
J Michael Younger
Elizabeth D Hughes
Danielle Marcotte
Philip A Barker
Thomas L Saunders
Colin S Duckett
McGill University · CAMontreal Neurological Institute and Hospital · CA

Funding

Lung Immunopathology Training Stipend SupplementT32HL007517 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LUKACS, NICHOLAS W · 1985 to 2022
$6.1M
Signal Transduction Pathways in CD30-positive LymphomasR01CA142809 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI DUCKETT, COLIN S. · 2010 to 2014
$1.3M
NCI NIH HHS R01 CA142809NHLBI NIH HHS T32 HL007517
6 · The paper itself

Abstract

A recent study revealed that ES (embryonic stem) cell lines derived from the 129 murine strain carry an inactivating mutation within the caspase 11 gene (Casp4) locus [Kayagaki, Warming, Lamkanfi, Vande Walle, Louie, Dong, Newton, Qu, Liu, Heldens, Zhang, Lee, Roose-Girma and Dixit (2011) Nature 479, 117-121]. Thus, if 129 ES cells are used to target genes closely linked to caspase 11, the resulting mice might also carry the caspase 11 deficiency as a passenger mutation. In the present study, we examined the genetic loci of mice targeted for the closely linked c-IAP (cellular inhibitor of apoptosis) genes, which were generated in 129 ES cells, and found that, despite extensive backcrossing into a C57BL/6 background, c-IAP1(-/-) animals are also deficient in caspase 11. Consequently, data obtained from these mice should be re-evaluated in this new context.

Indexed as

MutationAnimalsCaspasesCaspases, InitiatorCell LineEnzyme ActivationInhibitor of Apoptosis ProteinsMiceMice, 129 StrainCasp4 protein, mouseCaspasesCaspases, InitiatorInhibitor of Apoptosis Proteins

Identifiers

PMID22332634
PMCPMC3327503
OpenAlexW2119746857

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.