Evidence map›Paper›PMID 22331139›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2012

Comparative cytogenetic mapping between the lima bean (Phaseolus lunatus L.) and the common bean (P. vulgaris L.).

Eliene Mariano Bonifácio, Artur Fonsêca, Cícero Almeida, Karla G B Dos Santos, Andrea Pedrosa-Harand

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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 77 citations in OpenAlex.

  1. High rates of structural rearrangements have shaped the chromosome evolution in dysploid Phaseolus beans.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  2. Frontiers in plant science · 2023
    Article
  3. Article
  4. Chromosome and Genome Diversity in the GenusPlants (Basel, Switzerland) · 2021
    Review
  5. Oligo-FISH barcode in beans: a new chromosome identification system.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Multiple and independent rearrangements revealed by comparative cytogenetic mapping in the dysploid Leptostachyus group (Phaseolus L., Leguminosae).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Article
  11. Breaks of macrosynteny and collinearity among moth bean (Vigna aconitifolia), cowpea (V. unguiculata), and common bean (Phaseolus vulgaris).Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Article
  12. Diversity of repetitive sequences within compact genomes of Phaseolus L. beans and allied genera Cajanus L. and Vigna Savi.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2020
    Article
  13. Article
  14. Does the Genomic Landscape of Species Divergence inFrontiers in plant science · 2018
    Article
  15. Article
  16. Article
  17. Beans (Frontiers in plant science · 2017
    Review
  18. Article
  19. Article
  20. Integration of Lupinus angustifolius L. (narrow-leafed lupin) genome maps and comparative mapping within legumes.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Eliene Mariano BonifácioLaboratory of Plant Cytogenetics, Department of Botany, Federal University of Pernambuco, Rua Nelson Chaves, Recife, PE 50670-420, Brazil.
Artur Fonsêca
Cícero Almeida
Karla G B Dos Santos
Andrea Pedrosa-Harand
Universidade Federal de Pernambuco · BRUniversidade Federal de Alagoas · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The common bean (Phaseolus vulgaris) and lima bean (P. lunatus) are among the most important legumes in terms of direct human consumption. The present work establishes a comparative cytogenetic map of P. lunatus, using previously mapped markers from P. vulgaris, in association with analyses of heterochromatin distribution using the fluorochromes chromomycin A3 (CMA) and 4',6-diamidino-2-phenylindole (DAPI) and localization of the 5S and 45S ribosomal DNA (rDNA) probes. Seven BACs selected from different common bean chromosomes demonstrated a repetitive pericentromeric pattern corresponding to the heterochromatic regions revealed by CMA/DAPI and could not be mapped. The subtelomeric repetitive pattern observed for BAC 63H6 in most of the chromosome ends of common bean was not detected in lima bean, indicating lack of conservation of this subtelomeric repeat. All chromosomes could be identified and 16 single-copy clones were mapped. These results showed a significant conservation of synteny between species, although change in centromere position suggested the occurrence of pericentric inversions on chromosomes 2, 9 and 10. The low number of structural rearrangements reflects the karyotypic stability of the genus.

Indexed as

CytogeneticsCentromereChromomycin A3Chromosome MappingChromosomesDNA, RibosomalFabaceaeGenes, PlantHeterochromatinIndolesIn Situ Hybridization, FluorescenceKaryotypingModels, GeneticPhaseolusTelomereChromomycin A3DAPIDNA, RibosomalHeterochromatinIndoles

Identifiers

PMID22331139
OpenAlexW1966582608

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.