Evidence map›Paper›PMID 22328742›Full record

ArticleJournal of bacteriology2012

Genome sequencing of five Shewanella baltica strains recovered from the oxic-anoxic interface of the Baltic Sea.

Alejandro Caro-Quintero, Jennifer Auchtung, Jie Deng, Ingrid Brettar, Manfred Höfle, James M Tiedje, Konstantinos T Konstantinidis

Abstract read
In one paragraph

Article in Journal of bacteriology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Comparative genome analysis of the genusFrontiers in microbiology · 2023
    Article
  3. Article
  4. Article
  5. Genomic Analysis ofInternational journal of molecular sciences · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alejandro Caro-QuinteroSchool of Biology, Georgia Institute of Technology, Atlanta, Georgia, USA.
Jennifer Auchtung
Jie Deng
Ingrid Brettar
Manfred Höfle
James M Tiedje
Konstantinos T Konstantinidis

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here we describe five Shewanella baltica genomes recovered from the same sample, as well as 12 years apart from the same sampling station. These genomes expand the collection of previously sequenced S. baltica strains and represent a valuable resource for assessing the role of environmental settings on genome adaptation.

Indexed as

Genome, BacterialDNA, BacterialMolecular Sequence DataSeawaterSequence Analysis, DNAShewanellaDNA, Bacterial

Identifiers

PMID22328742
PMCPMC3294791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.