Evidence map›Paper›PMID 22326473›Full record

ArticleJournal of theoretical biology2012

Rotational model for actin filament alignment by myosin.

Callie J Miller, G Bard Ermentrout, Lance A Davidson

Open access · greenAbstract read
In one paragraph

Article in Journal of theoretical biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Callie J MillerDepartment of Bioengineering, University of Pittsburgh, Pittsburgh, PA, USA.
G Bard Ermentrout
Lance A Davidson
University of Pittsburgh · US

Funding

Training in Biomechanics in Regenerative MedicineT32EB003392 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WOO, SAVIO L-Y. · 2005 to 2020
$4.0M
The Biomechanics of morphogenesis in the frogR01HD044750 · NICHD · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI DAVIDSON, LANCE A. · 2005 to 2020
$3.8M
Biomechanics of MorphogenesisR37HD044750 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LANCE A. DAVIDSON · 2022 to 2026
$2.1M
Biophysics of development buffering: Temperature as a tool to study how the cytosR21ES019259 · NIEHS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVIDSON, LANCE A. · 2010 to 2011
$404k
NIBIB NIH HHS 2T32EB003392NIBIB NIH HHS T32 EB003392NICHD NIH HHS HD044750NICHD NIH HHS R01 HD044750NICHD NIH HHS R37 HD044750NIEHS NIH HHS ES019259NIEHS NIH HHS R21 ES019259
6 · The paper itself

Abstract

Dynamics of the actomyosin cytoskeleton regulate cellular processes such as secretion, cell division, cell motility, and shape change. Actomyosin dynamics are themselves regulated by proteins that control actin filament polymerization and depolymerization, and myosin motor contractility. Previous theoretical work has focused on translational movement of actin filaments but has not considered the role of filament rotation. Since filament rotational movements are likely sources of forces that direct cell shape change and movement we explicitly model the dynamics of actin filament rotation as myosin II motors traverse filament pairs, drawing them into alignment. Using Monte Carlo simulations we find an optimal motor velocity for alignment of actin filaments. In addition, when we introduce polymerization and depolymerization of actin filaments, we find that alignment is reduced and the filament arrays exist in a stable, asynchronous state. Further analysis with continuum models allows us to investigate factors contributing to the stability of filament arrays and their ability to generate force. Interestingly, we find that two different morphologies of F-actin arrays generate the same amount of force. We also identify a phase transition to alignment which occurs when either polymerization rates are reduced or motor velocities are optimized. We have extended our analysis to include a maximum allowed stretch of the myosin motors, and a non-uniform length for filaments leading to little change in the qualitative results. Through the integration of simulations and continuum analysis, we are able to approach the problem of understanding rotational alignment of actin filaments by myosin II motors.

Indexed as

Models, BiologicalActin CytoskeletonActomyosinAnimalsBiophysicsMonte Carlo MethodMyosin Type IIRotationStochastic ProcessesActomyosinMyosin Type II

Identifiers

PMID22326473
PMCPMC3307838
OpenAlexW2108187594

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.