Evidence map›Paper›PMID 22325793›Full record

ArticlePigment cell & melanoma research2012

Inherited variants in the MC1R gene and survival from cutaneous melanoma: a BioGenoMEL study.

John R Davies, Juliette Randerson-Moor, Kairen Kukalizch, Mark Harland, Rajiv Kumar, Srinivasan Madhusudan, Eduardo Nagore, Johan Hansson, Veronica Höiom, Paola Ghiorzo and 19 more

Open access · greenAbstract read
In one paragraph

Article in Pigment cell & melanoma research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 68 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Novel loss-of-function variant in DENND5A impedes melanosomal cargo transport and predisposes to familial cutaneous melanoma.Genetics in medicine : official journal of the American College of Medical Genetics · 2022
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Cancer management and research · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 15 institutions in 10 countries.

John R DaviesSection of Epidemiology and Biostatistics, Leeds Institute of Molecular Medicine, University of Leeds, Leeds, UK. j.r.davies@leeds.ac.uk
Juliette Randerson-Moor
Kairen Kukalizch
Mark Harland
Rajiv Kumar
Srinivasan Madhusudan
Eduardo Nagore
Johan Hansson
Veronica Höiom
Paola Ghiorzo
Nelleke A Gruis
Peter A Kanetsky
Judith Wendt
Dace Pjanova
Susana Puig
Philippe Saiag
Dirk Schadendorf
Nadem Soufir
Ichiro Okamoto
Paul Affleck
Zaida García-Casado
Zighereda Ogbah
Aija Ozola
Paola Queirolo
Antje Sucker
Jennifer H Barrett
Remco van Doorn
D Timothy Bishop
Julia Newton-Bishop
University of Leeds · GBEssen University Hospital · DEFundación Instituto Valenciano de Oncología · ESInstituto de Salud Carlos III · ESKarolinska University Hospital · SELatvian Biomedical Research and Study Centre · LVLeiden University · NLGerman Cancer Research Center · DEInserm · FRMedical University of Vienna · ATNottingham University Hospitals NHS Trust · GBOspedale Policlinico San Martino · ITUniversité de Versailles Saint-Quentin-en-Yvelines · FRUniversity of Genoa · ITUniversity of Pennsylvania · US

Funding

UNIVERSITY OF PENNSYLVANIA CAN CTR SUPPORT GRANTP30CA016520 · NCI · UNIVERSITY OF PENNSYLVANIA · PI SHELLEY L BERGER · 1985 to 2026
$222.3M
Genetic Epidermiology of MelanomaR01CA083115 · NCI · UNIVERSITY OF PENNSYLVANIA · PI BISHOP, DAVID TIMOTHY, ELDER, DAVID ERIC · 2001 to 2017
$13.0M
Molecular Epidemiology of MelanomaR01CA092428 · NCI · UNIVERSITY OF PENNSYLVANIA · PI KANETSKY, PETER A · 2002 to 2006
$2.3M
MELANOMA AND ALLELIC VARIATION IN THE MCIR GENEK07CA080700 · NCI · UNIVERSITY OF PENNSYLVANIA · PI KANETSKY, PETER A · 2000 to 2005
$634k
Cancer Research UK 10589Cancer Research UK C37059 ⁄ A11941Cancer Research UK C588 ⁄ A10589Cancer Research UK C588 ⁄ A4994Cancer Research UK C8216 ⁄ A6129NCI NIH HHS CA016520NCI NIH HHS CA092428NCI NIH HHS CA80700NCI NIH HHS K07 CA080700NCI NIH HHS P30 CA016520NCI NIH HHS R01 CA083115NCI NIH HHS R01 CA092428NCI NIH HHS R01 CA83115
6 · The paper itself

Abstract

Inherited MC1R variants modulate MITF transcription factor signaling, which in turn affects tumor cell proliferation, apoptosis, and DNA repair. The aim of this BioGenoMEL collaborative study in 10 melanoma cohorts was to test the hypothesis that inherited variants thereby moderate survival expectation. A survival analysis in the largest cohort (Leeds) was carried out adjusting for factors known to impact on survival. The results were then compared with data from nine smaller cohorts. The absence of any consensus MC1R alleles was associated with a significantly lower risk of death in the Leeds set (HR, 0.64; 95% CI, 0.46-0.89) and overall in the 10 data sets (HR, 0.78; 95% CI, 0.65-0.94) with some support from the nine smaller data sets considered together (HR, 0.83; 95% CI, 0.67-1.04). The data are suggestive of a survival benefit for inherited MC1R variants in melanoma patients.

Indexed as

Genetic VariationAdolescentAdultAgedAged, 80 and overCohort StudiesFemaleFollow-Up StudiesGenetic Predisposition to DiseaseHair ColorHumansInheritance PatternsMaleMelanomaMiddle AgedReceptor, Melanocortin, Type 1Receptor, Melanocortin, Type 1

Identifiers

PMID22325793
PMCPMC3490389
OpenAlexW1520625029

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.