Evidence map›Paper›PMID 22325289›Full record

ArticleBiophysical journal2012

Atomistic study of the long-lived quantum coherences in the Fenna-Matthews-Olson complex.

Sangwoo Shim, Patrick Rebentrost, Stéphanie Valleau, Alán Aspuru-Guzik

Abstract read
In one paragraph

Article in Biophysical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed.

  1. Article
  2. Quantum entanglement and coherence in plant signaling networks: a theoretical framework.Theory in biosciences = Theorie in den Biowissenschaften · 2026
    Review
  3. High-Frequency Tails in Spectral Densities.The journal of physical chemistry. A · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Local protein solvation drives direct down-conversion in phycobiliprotein PC645 via incoherent vibronic transport.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Quantum effects in biology: golden rule in enzymes, olfaction, photosynthesis and magnetodetection.Proceedings. Mathematical, physical, and engineering sciences · 2017
    Review
  18. Article
  19. Cysteine-mediated mechanism disrupts energy transfer to prevent photooxidation.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  20. Machine learning exciton dynamics.Chemical science · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Sangwoo ShimDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts, USA.
Patrick Rebentrost
Stéphanie Valleau
Alán Aspuru-Guzik

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A remarkable amount of theoretical research has been carried out to elucidate the physical origins of the recently observed long-lived quantum coherence in the electronic energy transfer process in biological photosynthetic systems. Although successful in many respects, several widely used descriptions only include an effective treatment of the protein-chromophore interactions. In this work, by combining an all-atom molecular dynamics simulation, time-dependent density functional theory, and open quantum system approaches, we successfully simulate the dynamics of the electronic energy transfer of the Fenna-Matthews-Olson pigment-protein complex. The resulting characteristic beating of populations and quantum coherences is in good agreement with the experimental results and the hierarchy equation of motion approach. The experimental absorption, linear, and circular dichroism spectra and dephasing rates are recovered at two different temperatures. In addition, we provide an extension of our method to include zero-point fluctuations of the vibrational environment. This work thus presents, to our knowledge, one of the first steps to explain the role of excitonic quantum coherence in photosynthetic light-harvesting complexes based on their atomistic and molecular description.

Indexed as

Molecular Dynamics SimulationQuantum TheoryBacterial ProteinsElectronsEnergy TransferLight-Harvesting Protein ComplexesPigments, BiologicalTemperatureTime FactorsBacterial ProteinsFMO bacteriochlorophyll protein, BacteriaLight-Harvesting Protein ComplexesPigments, Biological

Identifiers

PMID22325289
PMCPMC3274801

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.