Evidence map›Paper›PMID 22322528›Full record

ArticleUrological research2012

Relative deficiency of acidic isoforms of osteopontin from stone former urine.

A M Kolbach, O Afzal, B Halligan, E Sorokina, J G Kleinman, J A Wesson

Abstract read
In one paragraph

Article in Urological research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

A M KolbachNephrology Division, Department of Medicine, Medical College of Wisconsin and the Department of Veterans Affairs Medical Center, Milwaukee, WI 53295, USA.
O Afzal
B Halligan
E Sorokina
J G Kleinman
J A Wesson
Medical College of Wisconsin · USUnited States Department of Veterans Affairs · US

Funding

Influence of Urinary Macromolecules on Crystal AggregationR01DK082550 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI WESSON, JEFFREY A · 2009 to 2012
$818k
RENAL CRYSTAL GROWTH INHIBITOR PROTEINSR01DK048504 · NIDDK · MEDICAL COLLEGE OF WISCONSIN · PI KLEINMAN, JACK G · 1995 to 2002
$385k
NIDDK NIH HHS DK 082250NIDDK NIH HHS L40 DK082250NIDDK NIH HHS R01 DK048504NIDDK NIH HHS R01 DK082550
6 · The paper itself

Abstract

We have tested the relative electrophoretic mobility of osteopontin (OPN) isolated from urine obtained from normal individuals (NU) against similar samples derived from the urine of stone formers (SFU) using high-resolution isoelectric focusing (isoelectric point, pI range 3.5-4.5) in 2D electrophoresis, with Western blot detection. We also report the results from competitive ELISA analyses of these samples. We demonstrated that human urinary OPN has a discrete four band separation pattern that conforms to four previously documented OPN isoforms. The lower two M(r) isoforms migrate to a greater degree toward the acidic end of the gel than do the higher two M(r) isoforms. Densitometry of the signal reveals significant difference in the migration pattern of OPN from SFU as compared to that from NU based on an analysis of the spot intensities grouped in 0.1 pI unit increments. A novel method for the calculation of a weight-averaged pI based on the relative signal strength in an OPN 2D Western blot was developed. The analysis revealed a significantly increased weight-averaged pI values for the higher M(r) forms of OPN in the stone former compared to normal population. Additionally, alkaline phosphatase-treated NU samples resulted in a significant average pI shift of 0.05 units in the alkaline direction, suggesting that a decrease in the average degree of phosphorylation could be responsible for the difference between NU and SFU pI.

Indexed as

AdultAgedBlotting, WesternDensitometryEnzyme-Linked Immunosorbent AssayFemaleHumansMaleMiddle AgedOsteopontinPhosphorylationProtein IsoformsUrinary CalculiOsteopontinProtein Isoforms

Identifiers

PMID22322528
PMCPMC4978133
OpenAlexW2048222840

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.