Evidence map›Paper›PMID 22319209›Full record

ArticleNucleic acids research2012

Analysis of MRE11's function in the 5'-->3' processing of DNA double-strand breaks.

Shuren Liao, Catherine Guay, Thomas Toczylowski, Hong Yan

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Regulatory control of Sgs1 and Dna2 during eukaryotic DNA end resection.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  7. Article
  8. Article
  9. Article
  10. Single-molecule imaging reveals the mechanism of Exo1 regulation by single-stranded DNA binding proteins.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Shuren LiaoFox Chase Cancer Center, 333 Cottman Avenue, Philadelphia, PA 19111, USA.
Catherine Guay
Thomas Toczylowski
Hong Yan
Fox Chase Cancer Center · US

Funding

WORD PROCESSING CENTER--COREP30CA006927 · NCI · RESEARCH INST OF FOX CHASE CAN CTR · PI Margaret von Mehren · 1985 to 2026
$138.8M
Werner Syndrome Protein, DNA End Processing, and Double-Strand Break RepairR01GM057962 · NIGMS · RESEARCH INST OF FOX CHASE CAN CTR · PI YAN, HONG · 1998 to 2015
$4.5M
NCI NIH HHS P30 CA006927NIGMS NIH HHS GM57962-02
6 · The paper itself

Abstract

The resection of DNA double-strand breaks (DSBs) into 3' single-strand tails is the initiating step of homology-dependent repair pathways. A key player in this process is the MRE11-RAD50-NBS1 complex, but its contribution to and mechanistic role in resection are not well understood. In this study, we took advantage of the Xenopus egg extract system to address these questions. We found that depletion of MRE11 caused a dramatic inhibition of 5'-resection, even for the first nucleotide at the 5'-end. Depletion of Xenopus CtIP also inhibited 5'-strand resection, but this inhibition could be alleviated by excess MRN. Both MRE11 and CtIP could be bypassed by a DNA that carried a 3'-ss-tail. Finally, using purified proteins, we found that MRN could stimulate both the WRN-DNA2-RPA pathway and the EXO1 pathway of resection. These findings provide important insights into the function of MRE11 in 5'-strand resection.

Indexed as

DNA Breaks, Double-StrandedDNA RepairAnimalsCarrier ProteinsDNADNA-Binding ProteinsDNA HelicasesDNA Repair EnzymesExodeoxyribonucleasesMRE11 Homologue ProteinTumor Suppressor ProteinsWerner Syndrome HelicaseXenopusXenopus ProteinsCarrier ProteinsDNADNA-Binding ProteinsDNA HelicasesDNA Repair Enzymesexodeoxyribonuclease IExodeoxyribonucleasesMRE11 Homologue ProteinMre11 protein, XenopusNBN protein, XenopusRad50 protein, XenopusRBBP8 protein, XenopusTumor Suppressor ProteinsWerner Syndrome HelicaseWRN protein, XenopusXenopus Proteins

Identifiers

PMID22319209
PMCPMC3378884
OpenAlexW2034132918

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.