Evidence map›Paper›PMID 22319053›Full record

ArticleThe Plant cell2012

PPR2263, a DYW-Subgroup Pentatricopeptide repeat protein, is required for mitochondrial nad5 and cob transcript editing, mitochondrion biogenesis, and maize growth.

Davide Sosso, Sylvie Mbelo, Vanessa Vernoud, Ghislaine Gendrot, Annick Dedieu, Pierre Chambrier, Myriam Dauzat, Laure Heurtevin, Virginie Guyon, Mizuki Takenaka and 1 more

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 151 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Rapidly Evolved Genes in ThreeInternational journal of molecular sciences · 2024
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  7. Article
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  11. Article
  12. The complete mitochondrial genome ofFrontiers in plant science · 2024
    Article
  13. The complete mitochondrial genome ofFrontiers in plant science · 2024
    Article
  14. MaizeInternational journal of molecular sciences · 2023
    Article
  15. Article
  16. Article
  17. Review
  18. Genetic Localization and Homologous Genes Mining for Barley Grain Size.International journal of molecular sciences · 2023
    Review
  19. Article
  20. Article

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 3 countries.

Davide SossoUniversity of Lyon, Ecole Normale Supérieure de Lyon, Université Lyon 1, Unité Reproduction et Développement des Plantes, F-69364 Lyon, France.
Sylvie Mbelo
Vanessa Vernoud
Ghislaine Gendrot
Annick Dedieu
Pierre Chambrier
Myriam Dauzat
Laure Heurtevin
Virginie Guyon
Mizuki Takenaka
Peter M Rogowsky
École Normale Supérieure de Lyon · FRInstitut National de la Recherche Agronomique · MAUniversité Claude Bernard Lyon 1 · FRBiogemma (France) · FRLaboratoire d'Écophysiologie Moléculaire des Plantes sous Stress Environnementaux · FRLaboratoire Reproduction et Développement des Plantes · FRUniversität Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA editing plays an important role in organelle gene expression in various organisms, including flowering plants, changing the nucleotide information at precise sites. Here, we present evidence that the maize (Zea mays) nuclear gene Pentatricopeptide repeat 2263 (PPR2263) encoding a DYW domain-containing PPR protein is required for RNA editing in the mitochondrial NADH dehydrogenase5 (nad5) and cytochrome b (cob) transcripts at the nad5-1550 and cob-908 sites, respectively. Its putative ortholog, MITOCHONDRIAL EDITING FACTOR29, fulfills the same role in Arabidopsis thaliana. Both the maize and the Arabidopsis proteins show preferential localization to mitochondria but are also detected in chloroplasts. In maize, the corresponding ppr2263 mutation causes growth defects in kernels and seedlings. Embryo and endosperm growth are reduced, leading to the production of small but viable kernels. Mutant plants have narrower and shorter leaves, exhibit a strong delay in flowering time, and generally do not reach sexual maturity. Whereas mutant chloroplasts do not have major defects, mutant mitochondria lack complex III and are characterized by a compromised ultrastructure, increased transcript levels, and the induction of alternative oxidase. The results suggest that mitochondrial RNA editing at the cob-908 site is necessary for mitochondrion biogenesis, cell division, and plant growth in maize.

Indexed as

RNA EditingAlternative OxidaseAmino Acid SequenceArabidopsisChloroplastsCytochromes bGene Expression Regulation, PlantMicroscopy, Electron, TransmissionMitochondriaMitochondrial ProteinsMolecular Sequence DataMutagenesis, InsertionalNADH DehydrogenaseOxidoreductasesPhenotypePlant ProteinsAlternative OxidaseCytochromes bMitochondrial ProteinsNADH DehydrogenaseOxidoreductasesPlant ProteinsRNA, Plant

Identifiers

PMID22319053
PMCPMC3315240
OpenAlexW2096312357

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.