Evidence map›Paper›PMID 22318226›Full record

ArticleDevelopment (Cambridge, England)2012

The cyclophilin DIAGEOTROPICA has a conserved role in auxin signaling.

Meirav Lavy, Michael J Prigge, Kristof Tigyi, Mark Estelle

Open access · bronzeAbstract read
In one paragraph

Article in Development (Cambridge, England), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. International journal of molecular sciences · 2021
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Conserved regulatory mechanism controls the development of cells with rooting functions in land plants.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  11. Article
  12. DIAGEOTROPICA: news from the auxin swamp.Trends in plant science · 2015
    Article
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Meirav LavySection of Cell and Developmental Biology, University of California San Diego, La Jolla, CA 92093, USA.
Michael J Prigge
Kristof Tigyi
Mark Estelle
University of California, San Diego · US

Funding

MOLECULAR GENETICS OF AUXIN ACTION IN ARABIDOPSISR01GM043644 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI ESTELLE, MARK A · 1989 to 2021
$6.0M
Howard Hughes Medical InstituteNIGMS NIH HHS GM43644NIGMS NIH HHS R01 GM043644
6 · The paper itself

Abstract

Auxin has a fundamental role throughout the life cycle of land plants. Previous studies showed that the tomato cyclophilin DIAGEOTROPICA (DGT) promotes auxin response, but its specific role in auxin signaling remains unknown. We sequenced candidate genes in auxin-insensitive mutants of Physcomitrella patens and identified mutations in highly conserved regions of the moss ortholog of tomato DGT. As P. patens and tomato diverged from a common ancestor more than 500 million years ago, this result suggests a conserved and central role for DGT in auxin signaling in land plants. In this study we characterize the P. patens dgt (Ppdgt) mutants and show that their response to auxin is altered, affecting the chloronema-to-caulonema transition and the development of rhizoids. To gain an understanding of PpDGT function we tested its interactions with the TIR1/AFB-dependent auxin signaling pathway. We did not observe a clear effect of the Ppdgt mutation on the degradation of Aux/IAA proteins. However, the induction of several auxin-regulated genes was reduced. Genetic analysis revealed that dgt can suppress the phenotype conferred by overexpression of an AFB auxin receptor. Our results indicate that the DGT protein affects auxin-induced transcription and has a conserved function in auxin regulation in land plants.

Indexed as

Base SequenceBryopsidaCyclophilinsEvolution, MolecularF-Box ProteinsGene Expression Regulation, PlantIndoleacetic AcidsPlant ProteinsPlants, Genetically ModifiedReceptors, Cell SurfaceSequence Analysis, DNASignal TransductionSolanum lycopersicumTranscription, GeneticCyclophilinsF-Box ProteinsIndoleacetic AcidsPlant ProteinsReceptors, Cell Surface

Identifiers

PMID22318226
PMCPMC3283122
OpenAlexW2143160965

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.