Evidence map›Paper›PMID 22317907›Full record

ArticleJournal of clinical virology : the official publication of the Pan American Society for Clinical Virology2012

Detection of human rhinovirus C in fecal samples of children with gastroenteritis.

Susanna K P Lau, Cyril C Y Yip, David Christopher Lung, Paul Lee, Tak-Lun Que, Yu-Lung Lau, Kwok-Hung Chan, Patrick C Y Woo, Kwok-Yung Yuen

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Viruses Associated with Acute Conjunctivitis in Vanuatu.The American journal of tropical medicine and hygiene · 2023
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Epidemiologic, clinical, and virologic characteristics of human rhinovirus infection among otherwise healthy children and adults: rhinovirus among adults and children.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2015
    Observational
  8. Article
  9. Article
  10. Emerging respiratory viruses other than influenza.Clinics in laboratory medicine · 2014
    Review
  11. Article
  12. Article
  13. A newly designed real-time RT-PCR for SAFV detects SAFV-2 and SAFV-3 in the respiratory tracts of ill children during 2011.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Susanna K P LauState Key Laboratory of Emerging Infectious Diseases, Hong Kong. skplau@hkucc.hku.hk
Cyril C Y Yip
David Christopher Lung
Paul Lee
Tak-Lun Que
Yu-Lung Lau
Kwok-Hung Chan
Patrick C Y Woo
Kwok-Yung Yuen
University of Hong Kong · HKTuen Mun Hospital · CNHKU-Pasteur Research Pole · HKQueen Mary Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite recent discovery of the novel human rhinovirus species, HRV-C, little is known about the association of HRV-C in diseases other than respiratory tract infections.

objectivesTo investigate the presence of HRV-C in fecal samples of children with gastroenteritis. STUDY

design734 fecal samples from hospitalized children with gastroenteritis were subject to picornavirus detection by RT-PCR of the conserved 5'-NCR. Positive samples were subject to VP4 and 3D(pol) gene analysis for species determination. The clinical and molecular epidemiology of HRV-C and other picornaviruses was analyzed.

resultsPicornaviruses were detected in 113 (15.4%) of 734 fecal samples from children with gastroenteritis by RT-PCR of 5'-NCR, with 58 containing potential HRVs and 55 containing other enteroviruses. PCR of the VP4 and 3D(pol) regions was positive in 21 and 19 samples respectively (both regions positive in 8 samples). Sequencing analysis showed the presence of HRV-C in four samples, and diverse picornaviruses including HRV-A (n=2), HEV-A (n=2), HEV-B (n=2), HEV-C (n=21) and HPeV (n=2) in other samples, with co-detection of HRV-C and HPeV in one sample. Of the four children with HRV-C detected in fecal samples, three presented with diarrhea in the absence of respiratory symptoms, while one also had acute bronchiolitis. The four HRV-C strains from fecal samples belonged to the existing clade of diverse HRV-C genotypes, indistinguishable from previous respiratory strains.

conclusionsHRV-C can be detected in fecal samples of children with gastroenteritis, in the absence of respiratory symptoms. This study also represented the first to detect HPeV in our population.

Indexed as

ChildChild, PreschoolFecesFemaleGastroenteritisGenotypeHong KongHumansInfantMaleMolecular EpidemiologyMolecular Sequence DataPhylogenyPicornaviridae InfectionsReverse Transcriptase Polymerase Chain ReactionRhinovirusRNA, Viral

Identifiers

PMID22317907
PMCPMC7108355
OpenAlexW1987302952

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.