Evidence map›Paper›PMID 22314913›Full record

ArticleMolecular biology reports2012

Characterization and expression analysis of a trypsin-like serine protease from planarian Dugesia japonica.

Luming Zhou, Suge Wu, Dianchen Liu, Bo Xu, Xiufang Zhang, Bosheng Zhao

Abstract read
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In one paragraph

Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Article
  3. The transcriptomic response ofFrontiers in cellular and infection microbiology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Luming ZhouLaboratory of Developmental and Evolutionary, School of Life Sciences, Shandong University of Technology, Zibo, People’s Republic of China.
Suge Wu
Dianchen Liu
Bo Xu
Xiufang Zhang
Bosheng Zhao

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trypsin-like serine proteases are involved in large number of processes, especially in digestive degradation and immune responses. Here, we identify the characterization of a trypsin-like serine protease in planarian, Djtry, which interestingly has the incompletely conserved catalytic triad (K, D, and S). Phylogenetic analysis suggests that Djtry is an ancient type of trypsin-like serine proteases. The spatial and temporal expression patterns of Djtry are shown during regenerating and embryonic development by whole-mount in situ hybridization. Djtry is found to display a tissue specific expression pattern, with a predominant expression detected in whole gut region of intact and regenerating planarian. While the tissue- and stage-specific expression patterns during the embryonic development imply the roles of Djtry involve in yolk degradation and gut formation. Quantitative real-time PCR was carried out to analyze the function of this protease in vivo after planarians were stimulated to a bacterial challenge and food. The results showed that Djtry increased after a bacterial challenge and was basically stable for food. Therefore, the trypsin-like serine protease might be involved in the innate defense reactions against bacterial infection.

Indexed as

AnimalsDigestive SystemEscherichia coliGene Expression Regulation, EnzymologicHelminth ProteinsHost-Pathogen InteractionsImmunity, InnateLarvaMolecular Sequence DataPhylogenyPlanariansReal-Time Polymerase Chain ReactionSequence Analysis, DNASequence Analysis, ProteinSequence Homology, Amino AcidTranscription, GeneticHelminth ProteinsTrypsin

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.