Evidence map›Paper›PMID 22314361›Full record

ArticleNature communications2012

Modification of the carboxy-terminal flanking region of a universal influenza epitope alters CD4⁺ T-cell repertoire selection.

David K Cole, Kathleen Gallagher, Brigitte Lemercier, Christopher J Holland, Sayed Junaid, James P Hindley, Katherine K Wynn, Emma Gostick, Andrew K Sewell, Awen M Gallimore and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Nature communications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Article
  3. Blocking IAgLife sciences · 2022
    Article
  4. Article
  5. Article
  6. CD4Cell reports · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. The versatility of the αβ T-cell antigen receptor.Protein science : a publication of the Protein Society · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

David K ColeInstitute of Infection and Immunity, Cardiff University School of Medicine, The Henry Wellcome Building, Cardiff CF14 4XN, Wales, UK.
Kathleen Gallagher
Brigitte Lemercier
Christopher J Holland
Sayed Junaid
James P Hindley
Katherine K Wynn
Emma Gostick
Andrew K Sewell
Awen M Gallimore
Kristin Ladell
David A Price
Marie-Lise Gougeon
Andrew Godkin
Cardiff University · GBInstitut Pasteur · FRUniversity Hospital of Wales · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H001085/1Medical Research CouncilWellcome TrustWellcome Trust 086983/Z/08/2Wellcome Trust WT095767
6 · The paper itself

Abstract

Human CD4(+) αβ T cells are activated via T-cell receptor recognition of peptide epitopes presented by major histocompatibility complex (MHC) class II (MHC-II). The open ends of the MHC-II binding groove allow peptide epitopes to extend beyond a central nonamer core region at both the amino- and carboxy-terminus. We have previously found that these non-bound C-terminal residues can alter T cell activation in an MHC allele-transcending fashion, although the mechanism for this effect remained unclear. Here we show that modification of the C-terminal peptide-flanking region of an influenza hemagglutinin (HA(305-320)) epitope can alter T-cell receptor binding affinity, T-cell activation and repertoire selection of influenza-specific CD4(+) T cells expanded from peripheral blood. These data provide the first demonstration that changes in the C-terminus of the peptide-flanking region can substantially alter T-cell receptor binding affinity, and indicate a mechanism through which peptide flanking residues could influence repertoire selection.

Indexed as

BiotinylationCD4-Positive T-LymphocytesEpitopesFlow CytometryHistocompatibility Antigens Class IIHumansInfluenza, HumanInfluenza VaccinesModels, GeneticModels, MolecularMolecular ConformationOrthomyxoviridaePeptidesProtein Structure, TertiarySurface Plasmon ResonanceTemperatureEpitopesHistocompatibility Antigens Class IIInfluenza VaccinesPeptides

Identifiers

PMID22314361
PMCPMC3293629
OpenAlexW2007252306

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.