Evidence map›Paper›PMID 22314234›Full record

ArticleThe EMBO journal2012

Architecture and nucleic acids recognition mechanism of the THO complex, an mRNP assembly factor.

Alvaro Peña, Kamil Gewartowski, Seweryn Mroczek, Jorge Cuéllar, Aleksandra Szykowska, Andrzej Prokop, Mariusz Czarnocki-Cieciura, Jan Piwowarski, Cristina Tous, Andrés Aguilera and 3 more

Abstract read
In one paragraph

Article in The EMBO journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Alvaro PeñaDepartment of Structure of Macromolecules, Centro Nacional de Biotecnología (CNB-CSIC), Madrid, Spain.
Kamil Gewartowski
Seweryn Mroczek
Jorge Cuéllar
Aleksandra Szykowska
Andrzej Prokop
Mariusz Czarnocki-Cieciura
Jan Piwowarski
Cristina Tous
Andrés Aguilera
José L Carrascosa
José María Valpuesta
Andrzej Dziembowski

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The THO complex is a key factor in co-transcriptional formation of export-competent messenger ribonucleoprotein particles, yet its structure and mechanism of chromatin recruitment remain unknown. In yeast, this complex has been described as a heterotetramer (Tho2, Hpr1, Mft1, and Thp2) that interacts with Tex1 and mRNA export factors Sub2 and Yra1 to form the TRanscription EXport (TREX) complex. In this study, we purified yeast THO and found Tex1 to be part of its core. We determined the three-dimensional structures of five-subunit THO complex by electron microscopy and located the positions of Tex1, Hpr1, and Tho2 C-terminus using various labelling techniques. In the case of Tex1, a β-propeller protein, we have generated an atomic model which docks into the corresponding part of the THO complex envelope. Furthermore, we show that THO directly interacts with nucleic acids through the unfolded C-terminal region of Tho2, whose removal reduces THO recruitment to active chromatin leading to mRNA biogenesis defects. In summary, this study describes the THO architecture, the structural basis for its chromatin targeting, and highlights the importance of unfolded regions of eukaryotic proteins.

Indexed as

Adenosine TriphosphatasesBinding SitesChromatinDNA-Binding ProteinsNuclear ProteinsNucleic AcidsProtein BindingRibonucleoproteinsRNA-Binding ProteinsRNA, MessengerSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription FactorsTranscription, GeneticAdenosine TriphosphatasesChromatinDNA-Binding ProteinsHPR1 protein, S cerevisiaemessenger ribonucleoproteinMFT1 protein, S cerevisiaeNuclear ProteinsNucleic AcidsRibonucleoproteinsRNA-Binding ProteinsRNA-dependent ATPaseRNA, MessengerSaccharomyces cerevisiae ProteinsTHO2 protein, S cerevisiaeThp2 protein, S cerevisiaeTranscription FactorsYRA1 protein, S cerevisiae

Identifiers

PMID22314234
PMCPMC3321177

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.